Nitrosococcus halophilus: Nhal_3939
Help
Entry
Nhal_3939 CDS
T01198
Name
(GenBank) protease Do
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nhl01002
]
Nhal_3939
Peptidases and inhibitors [BR:
nhl01002
]
Serine peptidases
Family S1: chymotrypsin family
Nhal_3939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ_6
PDZ
Peptidase_S46
PDZ_Tricorn
GRASP55_65
PDZ_1
PDZ_4
Pro_Al_protease
Motif
Other DBs
NCBI-ProteinID:
ADE16949
UniProt:
D5C412
LinkDB
All DBs
Position
4054076..4055194
Genome browser
AA seq
372 aa
AA seq
DB search
MRIGKFFIVGLLSIALGNPSANAGLPLSLFEDSEELPSLAPMLEKATPSVVNIATRNRTP
VPGNPLFKDPFFRFFFNPPDSPKTIPRQSLGSGVIISAREGLVLTNNHVIDKADEITVTL
RDGRQLSAKVVGTDPPSDIAVIKIPAQDLTALPMANSDTLRVGDFVIAIGNPFGLGQTVT
SGIVSALGRSGLGIEGYENFIQTDASINPGNSGGALVNLRGELVGINTAIFTPDGGNVGI
GFAIPSNMAREIMEQLLKYGEVHRGRLGIAVQDLTPELIKAFGIDIRQGAVVVQVLPNSA
AAESELEVGDIIVAVDDQPVHNADQLRNLIGLSRAGKQINLTVLRNGKEIHLTITIKKIT
TTSAPGKIAPYS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatcgggaaattctttatagtcggcctgctgagtatcgcccttgggaaccccagc
gctaacgctggtttgcccttgagtttgttcgaggattcagaggaacttccctcccttgca
cccatgctcgagaaggctaccccctccgtggtcaacattgcaactcgcaaccgaacgcct
gttcctggaaatcccttattcaaagatccctttttccgttttttctttaatccacccgac
tcccctaaaacgattccccggcaaagtcttggctccggagtcatcatcagtgcccgcgaa
ggccttgtcctcaccaataatcatgtgattgataaagccgatgagattacggttaccctc
cgtgacgggcgccaactttccgcaaaggtagtcggtaccgatccccctagcgatatcgcg
gtcattaagattcccgctcaagatcttaccgctttgcccatggccaattccgatactctc
cgggtaggggacttcgtgattgccatcggcaatccctttggccttgggcaaaccgtcact
tcaggaattgtcagcgccttaggccgcagcggccttggaatcgaaggatatgaaaatttt
attcaaaccgatgcctccattaaccctggcaattcaggtggggcattggtcaatctccgg
ggagagctggtagggatcaatacggctatttttacccccgatggcggcaatgtgggcatc
ggctttgctattcccagtaatatggctcgggaaattatggaacaactccttaagtatggt
gaggtgcaccgtggtcggctcgggattgctgtccaagatctgacacctgagctgattaag
gctttcggtatcgatattcgtcagggagcggtagttgttcaagttctccccaactcggca
gccgcagaaagtgaacttgaggtaggcgacattatcgtggccgtcgatgatcagccggtt
cacaacgccgaccaactgcgcaacttaattggtctatctcgggcagggaaacaaatcaat
cttaccgtactccgtaatgggaaagagatccacctgaccatcaccattaagaaaatcacg
acaacatcggcacctggaaaaatagcgccttattcttaa
DBGET
integrated database retrieval system
