KEGG   Nitrosococcus halophilus: Nhal_3962
Entry
Nhal_3962         CDS       T01198                                 
Name
(GenBank) type III restriction protein res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nhl02048]
    Nhal_3962
Enzymes [BR:nhl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Nhal_3962
Prokaryotic defense system [BR:nhl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Nhal_3962
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N Helicase_C DUF4145 SNF2-rel_dom AAA_19 HSDR_N_2 RNase_Y_N AAA_22 Med4 DUF1192 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ADE16972
UniProt: D5C5B8
LinkDB
Position
pNHAL01:complement(154..3549)
AA seq 1131 aa
MASNFDFLTGDWAPFREDALHTEQHALTAPRTCAFYARRTLEKTVRWLYAHDPSLRKPYQ
DNLAALIHEPTFQTLVAPSLFPQIRLIHKVGNQAVHSDVRLRPVEGLQLTRATYNLLSWL
VRVYTPTQGAPLSVPPFNDQRLREPLQEAQEADKNAVELSRLQETLQEKDEAFKATQQRL
TASQEEIERLKAHIAEVKAENQAALGTVTFEESEAETRDLFIDVLLREAGWDPAGEQVRE
YAVEGMPHGQGRGYVDYVLWGDNGLPLAIVEAKRTQKSPMMGQRQAELYADCLEQMTGQR
PLIYTSNGYQTWLWDDTFYPPREVQGFATKDELQLMVHRRTSRKDLTQIPLNREIAGRYY
QEEGLRRVMERFQEARARGSLLVMATGTGKTRVSIAAVEFLMRARWVQRVLFLADRTALV
RQAKGAFAAHLPHASLVNLVTEKEEAGSRIVFSTYHTMMNLIDETQQEGRKRFGVNAFDL
IIIDEAHRSVYQKFKAIFDYFDSFLLGLTATPKAEVDRNTYHLFDLEDHVPTYAYELNQA
VADEYLVPPRPVSVPLKFQRQGIRYEHLSEEEKDAYEATFLDEETGQLPPEIDAAALNAW
LFNQDTVDKVLAQLMAQGLKIQGGDQLGKTIIFAKNHDHAEFIVQRFDQHYPHLAGKFCR
VIDNRVSYAQSLIDDFTLPHKAPFIAVSVDMLDTGIDVPEVVNLVFFKRVRSKTKFWQML
GRGTRLCPDLFGPGRDKPFFCIFDYCENLEFFSAHPEEVREAPLQESVKQKVFKSRLALA
TALQAMDDPNDSRPSLQSALLDQLHEGVTRMNLDNFLVRPHRQYVEAFSDRTRWQHLTPS
DELEIAEHLSGLPSPDEDDEFARRFDLLILNLQLALLEKTPSLERYQAQVKDLAQGLEEK
RAIPAVNAHMPLILDLQSDEYWQDMTLAMLETVRRQLRDLIKFVDKAGPREKVYTDFEDE
LGEVTEIEGLIQADPSLKHYRLKVETFLRTHQDHVTLQRLRHNQPITAKDLEGLEAVLFS
EAGPGSKEDFMKTYGEAPLGELIRRIVGLDRNAAKEAFAEFLSHSTLRADQIRFIDQIIE
HLARNGVMDLEALYEPPFTDIHYEGIDGVLPEQADKVIAIIKKVNKNARVA
NT seq 3396 nt   +upstreamnt  +downstreamnt
atggcctccaatttcgactttctcaccggtgactgggccccctttcgcgaagatgccctc
catactgaacagcatgccctcacggcccctcgcacctgtgccttctatgcccgtcggacc
ttagagaaaaccgtccgctggctctatgcccatgaccctagcctacgaaagccctatcaa
gacaatctcgcggcgctcatccacgagcccacctttcaaaccctggtggcccctagcctc
ttcccccaaatccgcctcatccacaaggtgggcaatcaggccgttcacagcgatgttcgg
ctgcgccctgtggaggggcttcagctcacccgggccacctacaatctgctgagctggctg
gtgcgggtctacacccccacccagggagcccccctatccgtaccccccttcaacgaccag
cggctgcgggagccccttcaggaggctcaggaggccgataaaaacgccgtagagctctcc
cgcttgcaggagacgctgcaagagaaagatgaagcctttaaagccactcagcagcggcta
acggcttcccaagaagaaattgaacgcttaaaggcccacatcgccgaggtcaaggcggaa
aaccaagccgctttaggtacggtcacctttgaagaatcggaagccgaaacccgggatctg
tttattgatgtgctgctgcgggaagcgggctgggacccggccggagaacaggtccgggag
tacgccgtggaaggtatgccccatgggcaggggaggggctacgtggattatgtcctctgg
ggcgacaatggcttgcctttggcgatcgtggaagccaagcgtacccagaaaagccccatg
atgggtcagcgccaggccgagctctatgcggattgtctagaacaaatgaccggccagcgt
cctcttatctacaccagcaacggctatcaaacttggctctgggacgataccttttaccct
ccccgggaagtgcaaggctttgccaccaaggatgagctgcagcttatggttcatcgtcgc
actagccgcaaggatctgacccaaatcccccttaaccgggagattgccgggcgctactat
caggaagaaggtctccgccgggtcatggaacggttccaggaagcgcgggcccggggcagt
ttgttggtcatggccaccggcaccggcaagacccgagtaagcatcgccgcggtggagttc
ctcatgcgggcccgttgggtccagcgggtcttgtttttggccgatcggacggccttagtg
cggcaggccaagggggcctttgctgcccatttgcctcacgcctccctggttaatctggtg
accgagaaggaagaggcggggagccggatcgtgttctctacttatcacacgatgatgaac
ctcattgacgagacccaacaagagggccgcaagcgctttggggtcaacgccttcgatctg
attatcatcgatgaagcccaccgctcggtctatcagaaatttaaggccatctttgactat
tttgatagcttcctgctagggcttaccgctacccccaaggcggaagtggaccgcaatacc
tatcacctgttcgatttggaagaccacgttcccacctatgcctatgaactgaaccaggcg
gtggctgatgaatatctggtgccgccccggccggtgtcggtgcccctcaaatttcagcgc
caggggattcgctatgagcacctgagcgaagaagaaaaggatgcctacgaagccaccttc
ttggatgaggagaccggccagttgcccccggagatcgatgccgccgccctcaatgcctgg
ctgttcaatcaagatacggtggataaggtcctggcccagttgatggcccaggggctgaag
attcaaggcggcgatcagctgggcaagaccattatctttgccaagaaccacgaccatgcc
gagtttattgttcaacgttttgatcaacattatccccacctggccgggaagttctgccgg
gtcatcgataatcgggtgagctacgcccagagtttgattgacgatttcactcttccccac
aaagcccccttcattgccgtctcggtggatatgctcgatacgggcatcgatgtgcccgaa
gtggtaaacctggtgttcttcaagcgggtgcgctccaaaaccaaattctggcagatgctg
ggccgcggcactcgcttgtgccccgatctctttggccccggccgggataagccgtttttt
tgcatttttgattactgtgaaaacctggagtttttcagcgcccatccggaagaagtccgg
gaagcgccccttcaggaatcggtcaagcagaaggtctttaaaagccgtttagcgctggcc
accgccttgcaggcaatggacgatccaaatgactcccgtccatccctccaaagcgcatta
ctggatcagctccatgagggggtcacccggatgaacctggacaatttcctggtccggccc
catcggcaatatgtggaggccttctccgatcggacccgttggcagcatctcactcccagc
gatgagctggagattgctgagcacttaagtggcttgccgtcccccgatgaggacgatgaa
tttgcccgccgcttcgatttgctgattcttaatctgcaactggctctcctggaaaaaaca
cccagtctggagcgctatcaggcgcaggtgaaagatctcgcccaggggttagaagaaaag
cgagctattccggcggtgaacgcccacatgcccctcattctcgatctgcaaagtgatgag
tattggcaggatatgactctggcgatgttagagaccgtgcggcgccagctgcgggatctc
atcaagttcgtggataaagccggtccccgggagaaagtttacaccgactttgaggacgaa
ctcggggaggtgactgagatcgaaggattgattcaagccgatcccagtctcaagcattac
cgcctcaaggtggagactttcctgcgcacccatcaggatcatgtcaccctccaacgcctc
agacacaaccagcctatcaccgctaaggatctggaaggtctggaagcggtgttgttttct
gaagccggtcccggcagcaaggaagactttatgaagacctatggcgaggcgcccctggga
gagctcatccgccgcatcgtgggcctggaccgcaacgccgccaaggaagcctttgctgag
ttcttatcccacagtaccctcagggcggatcaaatccgctttatcgatcagatcatcgag
cacctggcgcgtaatggggtgatggatctggaggccctctatgagcccccctttaccgat
atccactatgagggaattgatggggtgttgccggaacaggcggataaggtgattgcgatt
atcaaaaaagtgaataaaaacgccagagtcgcttga

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