Neorickettsia helminthoeca: NHE_0151
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Entry
NHE_0151 CDS
T03076
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nhm
Neorickettsia helminthoeca
Pathway
nhm03030
DNA replication
nhm03430
Mismatch repair
nhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHE_0151 (dnaE1)
03430 Mismatch repair
NHE_0151 (dnaE1)
03440 Homologous recombination
NHE_0151 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhm03032
]
NHE_0151 (dnaE1)
03400 DNA repair and recombination proteins [BR:
nhm03400
]
NHE_0151 (dnaE1)
Enzymes [BR:
nhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHE_0151 (dnaE1)
DNA replication proteins [BR:
nhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHE_0151 (dnaE1)
DNA repair and recombination proteins [BR:
nhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHE_0151 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AHX11118
UniProt:
X5H347
LinkDB
All DBs
Position
132433..135531
Genome browser
AA seq
1032 aa
AA seq
DB search
MAGTLEFAEYAKSSGVQPIIGTDLSVFYKNVDSSILLIARNEEGYRNLIKLSGAVSRRKI
TLEDVFAWHRGLIVLLGNFLIDAINSYSIDEVALLSDFKQVFERDLFIEIQRTTINGPQE
RQLIKLAYDNDIPLVATNEVLFPDREFREAHDVLTCIGAVTYLNDVNRMHYSAECYFKST
DEMFSLFSGLEEALHNTVLIARRCSFMPEVRDPVLPKFECATTENDELRKLVYSGLRKRM
KDNIPGNYLERLEYELSVIIEMKYAGYFLIVADFIRWSKENGIAVGPGRGSGVGSIVAWS
LGITGLDPIKFALFFERFLNPVRVSMPDFDVDFCQEKRHLVIEYIKKKYGHVAQIVTFGT
LQPRAALRDVGRVLQLPYSRVDKICKMIPNNPANPISLQEAIDLDKDLQEERKNDETMDK
LLDLALKLEGTLRHSSTHAAGIVISDKPIEEYLPIYYDQDSDIPVTQYSMKYVEKAGLVK
FDFLGLKTLTVINQACSLIREKIPDFDIESIPLNDRKTYELLSAGKAIGVFQLDNAYMCE
TLKRLHPDSLEDIIALISLNRPGPMANIPTYIARKHGKEKVEYPHPLLESSLKETFGVVI
YQEQVMEIVKLLAGYTLAEADILRRVMGKKIRSEMAEQTEKFIEGAKQNGIESEKAREIF
EMVEKFAGYGFNKSHAAAYALISYQTAFLKANFPIEFVTAALNLEIQHTDKLAILIQDAK
NCSISILPPDVTKSKVLFSIEDNAIRYSLAALKNVGEAAATFLQERNQFRTIEEFSGCID
AKIVNRRAVESLVKSGAMDAISPDRSNLFSLVNDIMEKKSDSRQMCLFDVDMRTTIHKVK
PWNFFEKTQYEFEALGLFLNSHPLQPYQKFLKLSPYQIAGVITALTIRSRRERKFAVLHV
STVTDIHTVICYESELIDVKRELFSLGAQVVLGIVKNDNGYVCNSISGLHDFLYSEFAGK
IAILVDRREQVDELKKILKHGGKWEITIVVNNDSRYVRIGLGKGFHCPLEELALVEDIGI
LRHRACIGSVDT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggctggtactctggagtttgctgaatatgcgaagtcctcaggtgtgcagccaattata
ggaacggatctttccgttttctataagaacgtcgattcaagtattctcctcattgctagg
aacgaggagggatacagaaacttaattaagttgtctggagctgtatcgcgcagaaaaatc
acactcgaggatgtctttgcctggcaccgtggattaattgtgcttctgggaaactttctt
attgatgctattaatagttactcgatcgatgaagtagctctcctctcagactttaagcaa
gtatttgagcgggacttattcatagaaatacaacgaaccacgatcaatggaccacaggag
aggcagctcataaagctagcttatgataacgatattccattagttgcgacaaatgaagtt
ctgttcccggatcgagaattcagggaagcacatgatgtgctgacatgtataggtgcagtt
acctacctcaatgatgtaaatcgcatgcattattccgctgagtgctacttcaaaagtacg
gatgagatgttttctcttttttctggtcttgaggaggcgctacataacacggttctaatc
gcgcgacgctgtagctttatgccggaggtcagggatcccgtactgccaaaatttgaatgt
gcaactactgaaaacgatgaactccgaaaattagtatattccggtttgagaaaaaggatg
aaggacaatattccgggaaactatttggagagactggaatacgaactaagtgttatcatc
gaaatgaagtatgcaggatacttcttaatcgtagcggatttcataaggtggagtaaggaa
aatggaatagctgtaggtccaggaagaggatctggtgttggatctatagttgcttggagc
ctcggaattacaggtctagatccaatcaaatttgcgttatttttcgagagatttttgaat
ccagttcgtgtatcaatgccagattttgatgtggatttctgtcaagaaaagcgtcatctg
gttatagagtatatcaaaaagaaatatggacacgttgcacagatagtcacttttgggacg
ttgcagccaagagccgcgctgagagacgtcggacgggtactgcagttaccttacagtcga
gtggataagatatgcaagatgattcctaataatcctgctaatcccatctccctacaggaa
gcaatcgatctggacaaggatctccaagaggaacgcaaaaatgatgagacaatggataag
cttctcgatctggcgctaaagttggaaggcactttgagacattcttcgacgcatgccgct
ggaatagtcatcagtgataagcccatagaagaatatcttcccatctactacgatcaggat
tcggatatacccgtcactcagtactcgatgaagtatgtcgagaaggctggattagtgaaa
tttgatttccttggtttgaaaactttgacggttattaatcaagcatgctctctgatacgt
gaaaagatacctgactttgatatagagtcgataccgctaaatgatcgaaaaacgtacgaa
ctgctatcagccggtaaggcaataggtgtattccagttggataatgcatacatgtgcgaa
acgttgaaacgtcttcatccggattctcttgaggacatcattgcgctgatatcactcaat
agaccgggtccaatggcgaacattcctacatacattgcgaggaaacatggtaaagaaaaa
gttgaatatccacatccgcttcttgaatcttcattgaaggagacctttggtgttgtgatc
tatcaggaacaagtaatggaaatagtaaagctccttgctggatacacacttgccgaagca
gatatcctacgtcgcgtcatgggaaagaaaatacgttcagagatggctgagcagacggag
aaatttatagaaggagcgaagcaaaatgggatcgaatctgaaaaagcgcgagagatcttt
gaaatggtggaaaaattcgcaggctatggtttcaataaatcccatgcggcggcatatgct
ctgatatcatatcagacagctttcttgaaggctaactttccaattgaattcgtcactgct
gcactgaatctagaaatacaacatacagataaattagcaattctcatccaggatgcaaaa
aattgtagtatttccatccttccacctgatgtgacaaagtccaaagttttgttctccatc
gaggataatgcaattcgatattcactggcagcgctgaagaatgtgggagaagcagcagca
acgtttctccaggaaagaaatcaatttagaacaattgaggagttcagtggatgtatcgat
gcaaagatagtcaatagaagagccgtagagagccttgtgaaatcaggggcaatggacgct
atctctcctgacagaagcaatcttttctccttggtaaatgacatcatggaaaaaaagagt
gacagcagacagatgtgcttgttcgatgtggatatgaggaccacgattcacaaggtaaaa
ccctggaatttctttgaaaaaactcaatacgaattcgaagcgcttggcttatttctaaat
agccatcctttacagccctatcagaaatttcttaaactttccccttaccagattgctggt
gtgattactgctctcacaatcaggtcaaggagagagaggaagttcgctgtattacatgtt
tccaccgttacggacattcatactgtgatatgctacgagtccgaactcatagatgttaaa
cgtgagctattttcacttggagcgcaggtggtcttgggtattgtaaagaatgataatggc
tacgtgtgtaatagcatatctgggttacatgatttcctctattcagagtttgccggaaaa
attgcaattctcgtagatcggagggagcaagtggatgagttaaaaaagatactaaaacat
ggtggtaaatgggagatcactattgttgtgaataatgactctagatatgtccgcatagga
cttggaaaaggttttcattgtccactggaagaattagctctagtagaagatatagggatc
cttagacatagagcatgcattgggtccgttgatacgtaa
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