Neorickettsia helminthoeca: NHE_0296
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Entry
NHE_0296 CDS
T03076
Name
(GenBank) sigma-54 interaction domain protein
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
nhm
Neorickettsia helminthoeca
Brite
KEGG Orthology (KO) [BR:
nhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nhm03110
]
NHE_0296
Chaperones and folding catalysts [BR:
nhm03110
]
Heat shock proteins
HSP100
NHE_0296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
AAA_5
Sigma54_activat
Clp_N
AAA_22
AAA_14
TniB
AAA_3
AAA_16
nSTAND3
ATPase_2
ClpB_D2-small
NACHT
AAA_7
RNA_helicase
Torsin
TsaE
Zeta_toxin
ResIII
AAA_6
NBD_SMAX1
PP1_inhibitor
Motif
Other DBs
NCBI-ProteinID:
AHX11255
UniProt:
X5HLI1
LinkDB
All DBs
Position
complement(257368..259599)
Genome browser
AA seq
743 aa
AA seq
DB search
MISPSLESTLQNALALAHSFSHSYVTLEHLLLALTEDEEIVQIASNSGINFGKLRDLLLQ
FLSTIHSLKYFSMDYSDISKIKPTLGLKRVIQRAQFHASIAELNQITGLHVLIEIFCEQD
SHAFAFLTQSNITMIGLMSHLPKTYKNKLPENGATCHADILRGTDASSFKEYCTDMNELA
LQGKIDKLINREKEIERTIEILLRRTKNNPIYVGEPGVGKTAILEGLVHAIVNGDVPHKL
RNARVYSLKIGSLLAGTRYRGDFEERIKMVINEIANCKNTILFIDEIHTIVGAGSTSNGS
IDAGNLLKPFLTKGPLRCIGATTYKEYSAHFEKDAALNRRFQRIEIEEPSLQNTLSIIDG
AKAYYEDFHRVRYTKTSLNEIVNLAHRYIPGRAFPDKAIDLMDDLGASYNADSSKVNKRR
DRKIDVKYVRETLAKRFNIPIAQLNCAVEDMLKSLEKNLKEVIYDQDEIIERLVHSLRPG
LLGLKGEKPIGTYLFGGETGIGKTELAKQIAKNLCMQFVRIDMSEYMESHSVSRLLGAPP
GYVGHDKGGFLVEALFKHGNTLILFDEIEKAHKDIQNILLQIMDYGCITDSTGRKSKFQN
CIVICTTNVGSSFIESNHLGFSKDCVKIDREDQFAKFFTKELLNRLDLALVFNRLDKNSL
EKIINKSIIEMRLLLEGKGIKLKFAEDVVKHLTGSHASGKINARSVEKKVKDDIMQAISS
KMLRSKPNEIVLVVRSGCISCAN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcccagtttagagagtacgctgcagaatgcacttgctttagcacacagcttt
tcgcattcatatgtgacgcttgaacatcttcttctagctcttactgaagacgaagaaatc
gttcagattgcatccaattccgggataaatttcgggaagttgagggacctactgctgcag
tttctgagtacgattcactctcttaagtacttttcgatggactattccgatattagcaag
attaagcccacactgggcttaaaaagagtcattcaaagagcgcaattccatgccagtata
gcagagctgaatcagattacgggactacacgtacttatagagatcttttgtgagcaggat
tcgcatgcatttgcatttctcacacagagcaacatcaccatgataggattgatgtcgcat
ttaccaaagacgtataagaataaacttcctgagaatggcgccacgtgccacgcagatata
cttagaggtacagatgcaagcagtttcaaagaatactgcacggacatgaatgagcttgcg
cttcaaggaaagatagataaattgatcaatcgcgaaaaggaaatagaaagaacaatcgag
attttactacggaggactaaaaacaatcccatatatgtcggagaaccaggcgtcggtaag
acagctatattggaaggattggttcatgctatcgtaaatggcgatgttccacataaactg
aggaatgctcgcgtatactctctaaaaataggttcattactggctggtacacgctataga
ggggatttcgaagaaaggattaagatggtcatcaatgaaatcgccaactgtaaaaacaca
atcctcttcatagatgagatccatacaatagtcggtgctggatccacaagtaacggatcc
atagatgctggaaatctgttgaaaccgttcctgacaaaaggacctctacgctgtatcggc
gcgacgacctataaagaatactctgctcacttcgaaaaagatgcagcactcaatagaaga
ttccagaggatagaaatagaagaaccatcacttcaaaacaccctaagtatcattgatggg
gcaaaagcatactatgaagacttccatagggtccgctacacgaagacatcgctaaatgaa
atagtgaacttagcgcatcgttatattccaggtagagcgtttccggataaagctatcgac
ttgatggatgatttaggagcttcatataacgcagattcatcaaaggtaaacaaaagacga
gatagaaagatagatgtaaaatatgtcagagagacattggcaaaacgctttaatattcct
atcgcgcaacttaactgcgctgtcgaggatatgctcaagtccctggaaaaaaatctcaag
gaagtaatctatgatcaagatgaaatcatagaacgattagtgcattcactgagacccggc
ctactcggcttgaaaggcgaaaaacctatcggaacctaccttttcggaggtgaaacaggt
atcggaaaaacggaattagcgaaacaaatcgcaaaaaatctgtgtatgcagttcgtcagg
attgatatgtcggaatatatggaaagtcattccgtctccagattgctgggcgcacctcca
gggtatgtgggtcatgacaaaggtggtttcctggtcgaagcattattcaagcatgggaac
accttaatactgttcgacgaaatcgagaaggcccacaaagatatacaaaatatacttctc
caaatcatggattatggatgtatcacagacagcacgggacgaaaaagtaagttccaaaat
tgcatagtgatatgtacgacaaatgtcggctcaagtttcatcgaaagtaatcacttagga
ttcagcaaagactgcgtcaaaattgatagagaagatcagttcgctaagtttttcactaaa
gaactgctaaacagattggatctagcactagtattcaatcgactcgataaaaatagtttg
gaaaaaataataaataagtctataatcgagatgcgtctacttcttgaaggcaagggaatc
aaattgaaatttgcagaggatgttgtgaagcatctaactggaagtcatgcatccggaaaa
ataaatgctagaagtgtagaaaagaaagtcaaggatgatataatgcaggcaatctcaagt
aaaatgttgcggtccaagcctaatgagatagtgttggtcgtcagaagtggatgcataagt
tgtgccaattga
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