Neorickettsia helminthoeca: NHE_0443
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Entry
NHE_0443 CDS
T03076
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nhm
Neorickettsia helminthoeca
Pathway
nhm03030
DNA replication
nhm03430
Mismatch repair
nhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHE_0443 (dnaQ)
03430 Mismatch repair
NHE_0443 (dnaQ)
03440 Homologous recombination
NHE_0443 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhm03032
]
NHE_0443 (dnaQ)
03400 DNA repair and recombination proteins [BR:
nhm03400
]
NHE_0443 (dnaQ)
Enzymes [BR:
nhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHE_0443 (dnaQ)
DNA replication proteins [BR:
nhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHE_0443 (dnaQ)
DNA repair and recombination proteins [BR:
nhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHE_0443 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHX11388
UniProt:
X5H3W5
LinkDB
All DBs
Position
389759..390457
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AA seq
232 aa
AA seq
DB search
MTRNRKIVLDTETTGLDIKNGDRVIEIGCVEVIDSFLTGNVFHVYLNPEREISKEATRVH
GITLDQLQDSPKFNEIADEFIAFIGSASVVAHNASFDVRFLNSELMRARCRTIIKPENVI
DTLAIARKMFPGSPASLDALCRRFRISLEQRTTHGALLDAQLLARVYIELSKGNQGNISF
VKELSDSASTSVTLEARKFLNTHEEMLGHAELIKRIKNPIWDEILSEDTEYL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgactcggaatcgtaaaattgtactggatactgagactactggtctggatataaagaat
ggagatcgtgttatagagatcggttgcgtggaggtgatcgattcgtttcttacaggaaat
gtcttccatgtttacttgaatccagagcgtgaaatttccaaagaagcaacacgagtgcac
ggtattactttggatcaattacaagatagtcccaaatttaacgaaatcgcagatgaattc
atagcttttataggctctgccagtgttgttgcccacaacgcaagctttgatgtgagattc
cttaattcagagcttatgagagccagatgtaggacaataataaaaccagaaaatgtcata
gataccttagcaatagctagaaaaatgtttcccggttccccggcatcactggatgcgttg
tgtaggagatttagaatttcccttgaacaaagaacaacgcatggcgccttgctagatgca
cagcttctagcgcgtgtctacatagaattgagtaaaggtaatcagggcaatatcagcttt
gtaaaggagttaagtgatagcgcttccacttcagtcacgttagaggccagaaaatttctt
aatactcatgaggaaatgctaggtcatgcggaacttatcaagcgtatcaagaatccgatt
tgggatgaaatattatctgaggacacagaatacttatag
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