Natronomonas halophila: HWV23_01565
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Entry
HWV23_01565 CDS
T07279
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nho
Natronomonas halophila
Pathway
nho03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV23_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_01565
Transcription machinery [BR:
nho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HWV23_01565
Prokaryotic type
Archaeal type
TFB
HWV23_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DZR
Sigma70_r4
Trm112p
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
BRF2-like_C_cyclin_rpt
Zn_ribbon_Nudix
Cas12f1-like_TNB
HTH_Tnp_ISL3
DUF7560
DZR_2
Zn_ribbon_RRN7
DUF7129
Zn_ribbon_RPB9
DNA_ligase_ZBD
DUF7575
TrmB
Auto_anti-p27
Zn_ribbon_PaaD
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QLD84447
LinkDB
All DBs
Position
complement(308707..309690)
Genome browser
AA seq
327 aa
AA seq
DB search
MSDTSIRTYTDENRTESTQQAESEEADESELTCPECGSRLEADTEHGETVCSECGLVVEE
DNIDRGPEWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSSQRQKM
QRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALQDDLLPGR
SIEGVSTASLYAAARQAGVPRSLDEVERVSRVDKMELTRTYRYIIRELNLEVKPADPESY
VPRFVSDLDLEDEVERRARELIEAARESGMLSGKSPVGLAAAAVYAAALLCNDKVTQSEV
SEVADISEVTIRNRYKELLEAAEVATA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacaagtatccgaacctacacggacgagaatcgaaccgagagtacccagcag
gcagagtccgaagaagccgacgagtccgaactgacctgtcccgagtgtggttcccgcctc
gaagcggacaccgagcacggcgagaccgtctgtagtgagtgtggcctcgtcgtcgaagag
gacaacatcgaccgcggtccggaatggcgtgccttcgacagctccgagaaggacgagaag
tcccgcgtcggcgcacccacgacgaacatgatgcacgacaagggcctgtcgaccaatatc
ggctggcaggacaaggacgcctacgggaactccctgtcctcgagccagcgtcagaagatg
cagcgcctccgcacctggaacgagcgcttccggacgcgcgactccaaggagcgcaacctc
aagcaggcgctgggcgaaatcgaccggatggcatcggcgcttggcctcccggacaacgtc
cgcgagaccgcctccgtcatctaccgccgcgcgctgcaggacgacctcctgccgggccgc
tccatcgagggcgtctcgacggcgtcgctgtacgccgccgcccgacaggccggcgttccc
cgtagcctcgacgaggtcgaacgcgtctcccgcgtcgacaagatggagctcacccggacg
taccgctacatcatccgggagctcaacctcgaggtcaagcccgccgaccccgaaagctac
gtcccgcggttcgtctccgacctcgacctcgaggacgaagtcgaacgccgcgctcgcgaa
ctcatcgaggcggcccgcgaatccggcatgctgtcgggcaaatcgcccgtcggccttgcc
gccgcggccgtctacgccgccgcgctgctctgcaacgacaaggtgacccaaagcgaggtc
agcgaggtcgctgacatctccgaggtcaccattcggaaccgctacaaggaactcctcgag
gcggccgaagtcgccaccgcgtaa
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integrated database retrieval system
