Natronomonas halophila: HWV23_01725
Help
Entry
HWV23_01725 CDS
T07279
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nho
Natronomonas halophila
Pathway
nho03022
Basal transcription factors
nho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV23_01725
09124 Replication and repair
03420 Nucleotide excision repair
HWV23_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_01725
03400 DNA repair and recombination proteins [BR:
nho03400
]
HWV23_01725
Enzymes [BR:
nho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWV23_01725
Transcription machinery [BR:
nho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HWV23_01725
DNA repair and recombination proteins [BR:
nho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HWV23_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_22
DUF7342
AAA
AAA_30
EutK_C
AAA_25
DUF4283
nSTAND3
HTH_20
AAA_11
DEXQc_Suv3
TrmB
Rep3_N
Motif
Other DBs
NCBI-ProteinID:
QLD84478
LinkDB
All DBs
Position
338685..340667
Genome browser
AA seq
660 aa
AA seq
DB search
MTDDAATDPPTETDADADSEDDPGPSADESPVDIDTFYDALEDRARPVVTASEVARIADC
SQAEAAKALQQLADDGRLTRFDAERDPVVWFPSDYRETAARERLTVFPKRREIIADQPTQ
FTRARLSQFAHLRDTNHESGYIYEVREQDIWNVPHETYEELRTTMRSALGGRYEALEEWV
EGQWERAHKFRLATHEDGYVVLEAQSADLLGNVAEQHLADGVLRARIGDTTAWVADDKTA
EVKRTLYEAGYPVQDHRDLETGDALPVELTLDLRPYQADWVQRFADAKSGVLVGPPGSGK
TVAALGIMADIKGETLILVPSRDLASQWHERILEDTNLTPDQIGEYHGGSKEIRPVTIAT
YQTAGMDRHRMLFDSRKWGLIVYDECQHIPSPVSRRSADLQTKHRLGLSATPIREDDKEQ
QIYTLIGPPIGTDWEALFEAGYVAEPEVELRYLPWASEMHRNEYGSSEGHEKRQLAATNP
AKVQEIQAILRANRGSKAIIFVEFIDQGDAIAEALNVPFISGETPHARRSRLFGEFRSGS
LDTIVVSRVGDEGIDLPDTEVAIAASGLGGSRRQGAQRAGRTMRPVGKARMYVLATRGTR
EEDFARQRTQHLAARGVRVREAEPEAFSGGRVAGEDDETATLNGPEEGTAADEDAASDEE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgacgccgccacggaccccccgacggagactgacgcagacgccgatagcgag
gacgaccccgggccatcggccgatgagtcgccggtcgacatcgacaccttctacgacgcg
cttgaggaccgcgcccgcccggtcgtgaccgccagcgaagtcgcccgtatcgccgactgc
tcacaggccgaggcggcaaaagccctgcagcagctcgccgacgatggccgtctcacgcgc
ttcgacgccgagcgggaccccgtcgtctggttcccgagcgactaccgcgagacggcggcc
cgcgaacgcctgacagtcttcccgaagcgccgggagattatcgccgaccagccaacccag
ttcacccgtgcgcgactctcgcagttcgctcatctccgggatacgaaccacgaatccggt
tacatctacgaggtccgcgaacaggacatctggaacgtcccacacgagacctacgaggag
ttgcggacgacgatgcggtcggccctcggtggccgctacgaggccctcgaagagtgggtc
gaaggccagtgggagcgggcccacaagttccggcttgcgacccacgaggacggctacgtc
gtcctcgaggcccagagcgcagacctgctcggcaacgtcgccgaacagcacctcgccgac
ggcgtgttgcgggcccgcatcggcgataccaccgcgtgggtcgccgacgacaagacggcc
gaagtcaagcgcacgctctacgaggccggctatcccgtacaggaccaccgagacctcgaa
accggcgacgctctgcccgtcgaactcaccctcgacctccggccgtatcaggccgactgg
gtccagcgcttcgcggacgccaaatcgggcgttctcgtcggcccgccggggtcgggcaag
accgtcgccgcgctcggcatcatggccgacatcaaaggtgagacgctgattctggttccc
tcccgcgatttggcgagccaatggcacgagcgcatcctcgaagacaccaatctcacaccg
gaccagatcggcgagtaccacggcgggtcgaaggaaatccggccggtcaccatcgccacc
taccagacggcagggatggaccgccatcggatgctcttcgactcccggaagtggggcctc
atcgtctacgacgagtgccagcacatcccctcgccggtcagtcgccgaagcgccgactta
cagaccaagcatcgcctcggtctctcggcgacgccgattcgggaagacgacaaggaacag
cagatttacaccctcatcgggccgcccatcggcaccgactgggaggcgctgttcgaggcc
ggctacgtcgccgaacccgaggtggaactccgatacctcccgtgggcttcggagatgcac
cgcaacgagtacggctccagcgagggccacgagaaacgccaactcgcggcgaccaacccc
gcgaaggttcaggagattcaggccatcctccgggccaaccgcggttcgaaggccatcatc
ttcgtcgagttcatcgaccagggcgacgccatcgccgaggcgctgaacgtcccatttata
agcggcgagacgccgcacgcccgccggagccggctgttcggtgagttccgctcggggtcg
ctggataccatcgtcgtctcgcgggtcggcgacgagggcatcgacctacccgacaccgaa
gtcgccattgcggcctcgggactgggtggctcgcgacgacagggcgcccagcgcgcgggg
cggacgatgcgacccgtcgggaaagcacggatgtacgtcctcgcgacgcgcggcacgcgc
gaggaggatttcgcccgccagcgcacccagcatctcgcggcacgcggcgtcagggtccgt
gaggccgaacccgaggccttcagcggcgggcgcgtcgccggcgaggacgacgagacggcg
acgctcaacgggccggaagaaggaacggcagccgacgaggacgccgccagcgacgaggag
taa
DBGET
integrated database retrieval system
