Natronomonas halophila: HWV23_01795
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Entry
HWV23_01795 CDS
T07279
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nho
Natronomonas halophila
Pathway
nho04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HWV23_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nho03019
]
HWV23_01795
03009 Ribosome biogenesis [BR:
nho03009
]
HWV23_01795
04131 Membrane trafficking [BR:
nho04131
]
HWV23_01795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nho04147
]
HWV23_01795
Messenger RNA biogenesis [BR:
nho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HWV23_01795
Ribosome biogenesis [BR:
nho03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HWV23_01795
Membrane trafficking [BR:
nho04131
]
SNARE
SNARE associated proteins
Others
HWV23_01795
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HWV23_01795
Exosome [BR:
nho04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWV23_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_2
AAA_14
TIP49
AAA_5
AAA_22
NPHP3_N
nSTAND3
RNA_helicase
AAA_33
AAA_7
AAA_28
AAA_lid_PRS2_C
IstB_IS21
Mg_chelatase
Parvo_NS1
AAA_3
AAA_18
ABC_tran
Sigma54_activat
TsaE
AAA_11
AAA_17
ATPase
AAA_30
Zeta_toxin
AAA_24
DUF815
AAA_19
Sigma54_activ_2
NB-ARC
SLFN-g3_helicase
bpMoxR
PhoH
Bac_DnaA
ATP-synt_ab
Zot
ApoC-I
Motif
Other DBs
NCBI-ProteinID:
QLD84491
LinkDB
All DBs
Position
complement(350250..352526)
Genome browser
AA seq
758 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRAAMDELDLENGDYIVIEGDARAVARVWPGYPEDEGKGV
IRIDGRLRQEADVGIDDSVTVEAADVNPAKQVTVALPQNLRIRGNIGPHIRDKLSGQAVT
KGQNVPFSLGLGPLSSQSGQRIPLKIADTDPDGTVVVTDSTKIEVSEKPAEQIAQQAGGA
GGAAGGEGSTPSVTYEDIGGLDEELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPG
TGKTLMAKAVASEIDAYFTNISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDS
IAPKRGETSGDVERRVVAQLLSLMDGLEERGDVIVIGATNRVDALDPALRRGGRFDREIE
IGAPDKGGRKEILQVHTRGMPLAEGIDLDQYAENTHGFVGADLASLTKESAMNALRRIRP
ELDLEQEELDAEVLEAMTVTEQDFKDALKQVTPSAMREVFVEVPDTSWESVGGLEDTKER
LRETIQWPLEYPEVFEEMDMQAPKGVLLYGPPGTGKTLMAKAIANEAESNFISIKGPELL
NKYVGESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGQRMGDSGVGERVVSQLLTELD
GLEDLEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARKAIFQVHTRNKPLADD
VDLDELAEKTDGYVGADIEAVCREASMAATREFINSVSREEAVQSVGNVRITAEHFEDAL
DEVGASVDDETREQYEEIEEEFTPGREPEEREVSRTFQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacggtcaaacccctcaagcagaaggacgccggccgcggactcgccgccatc
gaccgcgccgcgatggacgaactcgacctcgagaacggcgattacatcgtcatcgagggt
gatgcccgcgcggtcgcgcgcgtctggcccggataccccgaagacgaggggaagggcgtc
attcgcatcgacggccgcctccgtcaggaggccgacgtcggcatcgacgacagcgttacc
gtcgaggcggcggacgtcaaccccgcaaaacaggtcacggtcgccctcccgcagaacctc
cgtattcgcgggaacatcggcccccacatccgtgacaaactcagcggacaggccgtcacg
aagggacagaacgtgcccttctcgctcggcctcggcccgctctcctcgcagagcggccag
cgtatcccgctgaaaatcgccgacaccgaccccgacggaacggtcgtcgtgaccgattcg
accaaaatcgaggtcagcgaaaagcccgccgagcaaatcgcccagcaggccggtggtgcg
ggcggtgcagccggcggcgagggcagcacgccttcggtcacctacgaggacatcggcggc
ctcgacgaggaactcgaacaggtccgggagatgatcgaactcccgatgcggcaccccgaa
ctgttccagcagctcggtatcgagccgccgaagggcgtcctcctgcacggcccgcccggc
accgggaagacgctcatggccaaggccgtcgccagcgagattgacgcctacttcacgaac
atctcgggccccgaaatcatgtcgaaatactacggggaatccgaggagcaactccgtgag
gtcttcgaggaggccgaggagaacgccccggccatcatcttcatcgacgaactggactcc
atcgcgcccaagcgcggcgagaccagcggcgacgtcgaacgccgtgtcgtcgcccaactc
ctctcgctgatggacggtctcgaagagcgcggcgacgtcatcgtcatcggcgcgaccaac
cgtgtcgacgcactcgaccccgcgctccgccgtggcggccgcttcgaccgcgaaatcgaa
atcggcgcgcccgataagggcggccggaaggaaatcctgcaggtccacacccgcgggatg
ccgctggccgagggcatcgacctcgaccagtacgccgagaacacccacggcttcgtgggc
gcggacctcgcgtcgctgaccaaggagtcggcgatgaacgcgctccgccgcatccggccc
gaactcgacctcgaacaggaggaactcgacgccgaggtcctggaggcgatgacggtcacc
gagcaggacttcaaggacgccctcaagcaggtcacgccctcggcgatgcgcgaggtgttc
gtcgaggttcccgatacctcctgggagagcgtcggcggcctcgaagacaccaaggaacgg
ctccgcgaaaccatccagtggccgctcgaataccccgaggtcttcgaggagatggacatg
caggcccccaagggcgtcctgctgtacggcccgccgggtacgggtaagaccctgatggcg
aaggccatcgccaacgaggcggagtcgaacttcatctccatcaagggccccgaactgctc
aacaagtacgtcggcgagtccgagaagggcgtccgtgaggtcttcgagaaggcgcggtcg
aacgcaccgaccgtcgtcttcttcgacgaaatcgactccatcgcgggcgaacgcggccag
cggatgggcgactccggcgtcggcgaacgcgtcgtctcccagctgctgaccgaactcgac
gggctagaggacctcgaggacgtcgtcgttatcgcgacgaccaaccgaccggacctcatc
gactcggcgctcttgcgccccggtcgactggaccgccacgtccacgtccccgtccccgac
gaggacgcccggaaggccatcttccaggtccacacccggaacaagccgctggccgacgac
gtcgacctcgacgaactggccgaaaagacggacggctacgtgggtgccgacatcgaggcg
gtctgccgtgaagcctccatggccgcgacgcgggagttcatcaacagcgtctcccgtgag
gaggccgtccaaagcgtcggcaacgtccgcatcaccgccgagcacttcgaggacgccctc
gacgaggtcggcgccagcgttgacgacgagacccgcgaacagtacgaggaaatcgaggaa
gagttcacccccggccgcgagccggaagaacgcgaagtcagccggacgttccagtaa
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