Natronomonas halophila: HWV23_05845
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Entry
HWV23_05845 CDS
T07279
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
nho
Natronomonas halophila
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nho03019
]
HWV23_05845
Messenger RNA biogenesis [BR:
nho03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
HWV23_05845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DnaJ_CXXCXGXG
UB2H
Motif
Other DBs
NCBI-ProteinID:
QLD85267
LinkDB
All DBs
Position
complement(1056143..1058170)
Genome browser
AA seq
675 aa
AA seq
DB search
MSQQVADVDTLFLHEGRDEYTVVVRRDGERLLRGRLEMKQTSAGPRPGRFRVKDGDDEVP
RRPEQFVEMARRARRIRISEQTSRDGRRELEAMLDGYQLDAKQVRTCRYCAGKGRYSPLT
SETAIQADDEHICPDCARRELEREANYRGLRSGARDRLEDLLLEVGDLERVKNLLSGQLD
PELTKFDEISATTDDIDLVSTRDIDVHGDLKSQLQKFDELLPVQSLAVENGLLDGDDQLV
VSATATGKTLVGELAGIDRALKGEGKMLFLVPLVALANQKHEDFEDDYGDLLDVSIRVGS
SRIRDDGNRFDPHADVIVGTYEGIDHALRTGKDMGDIGTVVIDEVHNLGEEGRGHRLDGL
ISRLKHYCETNRCDTQWVYLSATVGNPGELARKLGAKCIEFEERPVPIERHVTFADGQEK
LDIENKLVKRAFDSKSSMGYRGQTIIFTNSRRRCHEISRKLEYDSAPYHAGLDYGRRKKV
ERQFGNQDLAAVVTTAALAAGVDFPASQVVFDSLAMGIEWLNVQEFEQMLGRAGRPDYHD
QGTMYMLVEPDTTYHNSMEMSEDEVAFKLLKGEMEPVITRYDETSAIEETLANITVAGKG
AKRLNDRMVGEVPTKHAVGKLLEYDFIDGFTPTPIGRAVTEHFLEPDEAFAMLDAIRKGK
DPYELVAEIELRDEH
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcaggtcgccgacgtcgataccctcttcctgcatgagggtcgcgacgagtac
accgtcgtcgtccgccgcgatggcgagcgactgctccgcgggcgcctcgagatgaagcag
acgagcgccggcccgcgacccggccgcttccgcgtcaaggacggcgacgacgaggtgccg
cgccgccccgaacagttcgtcgagatggcccgccgtgctcgccgtatccgcatctccgag
cagacctcccgcgacggacggcgggaactcgaagcgatgctcgacggctaccaactcgac
gccaagcaggtccggacctgccggtactgcgccggcaagggccgctactcgccgctgacc
tccgagacggccattcaggccgacgacgagcacatctgcccggactgtgcccgccgcgaa
ctcgaacgtgaggccaactaccgcggcctccggtcgggggcccgcgaccgcctcgaagac
ctcctgctggaagtcggcgacctcgaacgcgtcaagaacctgctgtcggggcaactcgac
cccgaactcacgaagttcgacgaaatcagcgccacgacggacgatatcgacctcgtctcc
acgcgcgatatcgacgtccacggcgacctgaaatcccaactccagaagttcgacgaactc
ctgccggtccagagtctggccgtcgaaaacggcctgctggacggcgacgaccaactggtc
gtctccgcgacggcgaccgggaagacgctcgtcggcgaactggccggcattgaccgcgcg
ctgaaaggcgaggggaagatgctctttctcgtccccctcgtggcgctggccaaccagaaa
cacgaggacttcgaggacgattacggcgacctgctcgacgtctcgattcgggtcgggtcc
tcgcgcatccgcgacgacggcaaccgcttcgacccccacgccgacgtcatcgtcggcacc
tacgagggcatcgaccacgccctccggacgggcaaggacatgggcgacatcggcaccgtc
gtcatcgacgaagtccacaacctcggcgaggagggccgcggccaccgcctcgacggcctc
atctcccgcctgaaacactactgcgagacgaaccgctgcgatacgcagtgggtctacctc
tcggcgacggtcggcaaccccggcgaactcgccagaaaactcggcgccaaatgcatcgag
ttcgaggagcggccggtgcccatcgaacgccacgtcaccttcgcggacggccaggagaaa
ctcgatatcgagaacaaactggtcaaacgcgctttcgactcgaaatcctcgatgggctat
cgcggtcagaccatcatcttcacgaactcgcggcggcgctgccacgagatttcgcggaaa
ctggaatacgattccgcgccgtaccacgccggcctcgattacggccgccggaagaaggtc
gaacgccagttcggtaatcaggacctcgccgcggtcgtcactactgccgcgctcgctgcg
ggtgtcgacttccctgcctcgcaggtcgtcttcgactcgctggcgatgggcatcgagtgg
ctcaacgttcaggagttcgagcagatgctcgggcgtgcgggccggccggactaccacgac
caggggacgatgtacatgctggtcgaaccggataccacctaccacaactcgatggaaatg
agcgaggacgaggttgccttcaaactcctcaagggcgagatggagccggtcatcacccgt
tacgacgagacctcggccatcgaggagacgctggccaacatcaccgtcgctgggaagggt
gccaagcgcctcaacgaccggatggtcggcgaggtgccgacgaaacacgccgtcgggaaa
ctgctcgaatacgacttcatcgacggcttcaccccgacacccatcggtcgggccgtcacc
gagcacttcctcgaacccgacgaggccttcgcgatgctcgacgcgattcggaaggggaag
gacccctacgaactcgttgccgagattgagttgcgggacgagcactag
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