Natronomonas halophila: HWV23_06060
Help
Entry
HWV23_06060 CDS
T07279
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nho
Natronomonas halophila
Pathway
nho03022
Basal transcription factors
nho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV23_06060
09124 Replication and repair
03420 Nucleotide excision repair
HWV23_06060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_06060
03036 Chromosome and associated proteins [BR:
nho03036
]
HWV23_06060
03400 DNA repair and recombination proteins [BR:
nho03400
]
HWV23_06060
Enzymes [BR:
nho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HWV23_06060
Transcription machinery [BR:
nho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HWV23_06060
Chromosome and associated proteins [BR:
nho03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HWV23_06060
DNA repair and recombination proteins [BR:
nho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HWV23_06060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
nSTAND3
PhoH
F-box_5
AAA_16
AAA_22
AAA_25
Histone_HNS_N
Motif
Other DBs
NCBI-ProteinID:
QLD85307
LinkDB
All DBs
Position
1100421..1102817
Genome browser
AA seq
798 aa
AA seq
DB search
MSSEGDEAAATADDETSARPDWRPIFGHDEPYGDQIDGIETAIETAEDGGFLALEGACGT
GKTMLALTAGIHLVRDPDSKFERVFVLTSVKQQLRQFEEDLETINANLPDDWQPISAMTL
VGKADVCPYNLANAGDIDDTNVYERCEGLRERTRGLADETTPGSLVDQARSQQVGLADSG
AQNNGASFLEAAGEPTPYPHDTPESGEHDVEYCPFYAQYLDDLPEDGDPVEAVPFDHTEM
GLIESEDLVRRAGSHGSCPHSVMGALLPHVEVLVGNYYHAFDPTTVESFTGALIDDETFV
VCDEAHMLEPRVRDLVGDSVSDRALQDAENELSRVIQPVAAIEEAGQGAQHGAEAKQKAQ
TIREELQETEVSLSELRDTRRFFTALGDELDRRVTDHLDEERPGWKRNLTDLEDDEIPLR
DPETPGTDELTRWAERNGFDARVWTRAETVCAVAKHVLDTIDDDDKRRAVSGVGRTLATW
YRVDHTDFFREIDLERTWDDTQPAESWKRVYTASFSLHNCLPAGAIGEQLGEFGAGVLMS
ATLEPLDVFTEVTGLQHLEEEEDRPVVERTYGLEFPEDNRASFALSAPKFTYSNRGDPGE
ETDTRRAHATAIQRVADSPGNVLVGMPSYREAEWAASVLEDCDKEVLLDEATDDVATENL
KQEFFEGDPKVLVTSLRGTLTEGVDYKGDRLSAAIVCGVPIINTASPRTRAVRTAYDRAF
GDGFKYALSVPAVRKARQAIGRVIRGPEETGVRVLCDERFARDSWDSVRGLLGEAEREEF
QPVSTDMFDFALDRFWSG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctccgagggtgacgaggcggccgcaaccgccgacgacgagacgagtgctcgcccc
gactggcggccgattttcggccacgacgagccctacggcgaccagatagacggcatcgag
acggccatcgagaccgccgaagacggcggctttctcgccttagaaggtgcctgcgggacg
ggcaagacgatgctggcgctgaccgccggcatccacctcgttcgggaccccgactcgaaa
ttcgagcgcgtgttcgtcctcacgagcgtcaaacagcaactccggcagttcgaggaggac
ctcgaaaccatcaacgccaacctgcccgacgactggcagccgatttcggcgatgacgctc
gtcggcaaggccgacgtctgcccgtacaacctcgccaacgccggcgatatcgacgatacg
aacgtctacgaacggtgtgagggcctccgcgagcgcacgcgagggctagccgatgagacg
acgcccgggtcgttggtcgaccaggcccgaagccagcaggtcggcctcgccgactccggc
gcccaaaacaacggcgcgagttttctggaagccgcgggtgaaccgacaccgtatccccac
gacacgcccgaatccggggagcacgacgtcgaatactgccccttctacgcgcagtacctc
gatgacctgcccgaggacggcgaccccgtcgaggccgttcccttcgaccacaccgagatg
ggtctcatcgaaagcgaggacctcgtccggcgggcgggcagccacggctcctgcccccac
tcggtgatgggcgcgctcctgccgcacgtcgaggtcctcgtgggcaactactaccacgcc
ttcgacccgacgaccgtcgaatccttcaccggcgcgctcatcgacgacgagacgttcgtc
gtctgtgacgaggcccacatgctggaaccccgcgtccgggacctcgtcggcgacagcgtc
tccgaccgggcgctgcaggacgccgaaaacgaactctcgcgtgtcatccagcccgtcgca
gccatcgaggaagccgggcaaggcgcccagcacggcgccgaagcaaagcagaaagcccag
acgattcgggaggaacttcaggagaccgaggtctcgctctcggagttgcgcgacacgcgt
cgcttcttcaccgcgctcggcgacgaactcgaccgccgggtgaccgaccatctggacgag
gaacgaccgggctggaaacggaacctgacggacctcgaggacgacgagattccgcttcgg
gaccccgagacgcccggcaccgacgagttgacgcggtgggccgagcgcaacggcttcgac
gcgcgggtctggacgcgcgcggagacggtctgtgcggtcgccaagcacgtcctggatacc
atcgatgacgacgacaagcgccgcgcggtctcgggcgtcggccgcacgctggcgacgtgg
taccgggtcgaccacaccgacttcttccgggaaatcgacctcgaacggacgtgggacgac
acccaaccggccgaatcctggaagcgggtctacaccgccagtttctcgctgcacaactgt
ctgccggcgggtgccatcggcgagcagttaggggagttcggcgcgggcgtgctgatgagc
gcgacgctggagccgctggacgtcttcaccgaagtgacgggcctccagcatctcgaagag
gaggaagaccgacccgtcgtcgagcggacgtacggcctcgaattccccgaggacaaccgc
gcctccttcgcgctatcggcgccgaagttcacctactcgaaccgaggggaccccggcgag
gagaccgacacgcggcgggcccacgccacggcgatacagcgggtcgccgactcgccgggc
aacgtcctcgtcgggatgccctcctatcgggaagccgagtgggccgcctcggtgctggag
gactgcgacaaggaagtcctgctcgacgaggcgaccgacgacgtggccacggagaacctc
aaacaggagttcttcgagggcgacccgaaggtgctggtgaccagtcttcggggcacgctg
actgagggcgtcgactacaagggcgaccgcctctcggcggccatcgtctgcggcgtcccg
attatcaacaccgccagcccccggacgcgggccgttcggacggcctacgaccgggccttc
ggggacggcttcaaatacgcgctgtcggtgcccgccgtccggaaggcccgacaggcaatc
ggccgcgtgattcgtggccccgaggagacgggcgtgcgggtgctctgcgatgagcggttc
gcccgcgactcctgggacagcgttcgggggttgctcggcgaggccgaacgggaggaattc
cagcccgtcagcaccgatatgttcgatttcgcgctagacaggttctggtcgggatag
DBGET
integrated database retrieval system
