Natronomonas halophila: HWV23_07125
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Entry
HWV23_07125 CDS
T07279
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
nho
Natronomonas halophila
Pathway
nho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWV23_07125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_07125
Enzymes [BR:
nho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWV23_07125
Transcription machinery [BR:
nho03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HWV23_07125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
FYDLN_acid
DUF4776
Motif
Other DBs
NCBI-ProteinID:
QLD85506
LinkDB
All DBs
Position
complement(1293288..1296242)
Genome browser
AA seq
984 aa
AA seq
DB search
MQGKAPKEIGQLSFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGLE
CKTCGKHSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRECSRLCLTEDEQAEFRDR
LDRTRQLGEDLNDVTKAAIRLARKKDRCPHCGEKQFDINHEKPTTYYEVQQVLSSEYPER
IAAAMEGRDPDAEEGEEDEDREPVSPNELSEETGIDLERINQILSGEFRPKKDDRKALEK
ALDVDLTEEDMNKLMPSDIRDWFEDIPDEDMRTLGIDAEKSRPEWIILTVLPVPPVTARP
SITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEI
SGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPD
RVASEMTQTMIVNDRNLDDARRYVANGPEVHPGANYVKRPDGRRLKVTEKNCEELAEKIE
PGWEVARHLIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEM
NMHALQNEEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGLYLLTNQNPKFNETQAL
DLLRATSIDELPESDGTDEEGKQYWTGRTVFSELLPDGLNLEFTSSAGDTVLIEDGELVS
GTIDEDAAGAFGGEVVDTICKVYGNTRARVFVNEVATLAMRSIMHFGFSIGIDDESIERE
AEEQIAEAIDGAYDRVQDLIQAYRDGELESLPGRTVDETLEMKIMQTLGKARDSAGDIAD
DHFDNDNPAVVMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFKRNDLSA
DAHGFVENSYRNGLTPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDG
TVRDTSDTIVQFEFGEDGTSPVRVSSSEDYDIDIESITDRIVDEEFASEQEKQEFLGIEE
HETNLSEHGERWRADSATGVESDD
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaaagcccccaaagaaatcggccagctcagtttcggcctcatggaccccgag
gagtaccgtgacatgtcggccacgaaagtgattacggccgacacctacgacgacgacggt
ttccccatcgacatggggctgatggacccccgactgggcgtcatcgaccccggtctggaa
tgtaagacctgcgggaagcactcgggttcgtgtaacggccacttcggccacatcgaactc
gccgcgcccgtcatccacgtcggcttcgcgaaactcatccgccgcctgcttcgcggtacc
tgtcgtgagtgttcgcgactctgtctgaccgaggacgaacaggcggagttccgcgaccga
ctcgaccggacccgccaactcggcgaggacctcaacgacgtgacgaaggcggccatccgc
ctcgcacggaagaaggaccgctgtccgcactgcggcgaaaagcagttcgacatcaaccac
gagaagccgacgacctactacgaggtccagcaggtcctctcgtcggagtaccccgagcgc
atcgccgcggccatggaaggtcgcgaccccgatgccgaagagggcgaggaagacgaggac
cgcgaaccggtctcgccgaacgaactctccgaggagacgggcatcgacctcgaacgcatc
aaccagatcctctccggggagttccgccccaagaaggacgaccggaaggccctcgagaag
gcgctggacgtcgacctgaccgaggaggacatgaacaagctgatgccctcggacatccgc
gactggttcgaggacatcccggacgaggacatgcgcacgctcggcatcgacgccgagaag
tcccgtcccgagtggatcatcctgacggtgcttccggtcccgccggtaaccgcgcggccg
tcgattacgctggacaacggccagcggagcgaggacgacctcacccacaagctggtcgac
atcatccgcatcaaccagcggttcatggagaaccgcgaggcgggtgcgccccagctgatt
atcgaggacctctgggaactgctccagtaccacgtcacgacgttcatggacaacgagatt
tcgggcacgccgccggcccgacaccgctccggccggccgctcaagaccctcagccagcgg
ctgaagggcaaggaaggccgattccgtggcagcctctccggcaagcgtgtcaacttctcc
gcgcggaccgtcatctcgccggacccgaccctgtcgctgaacgaggtcggcgtccccgac
cgcgtcgccagcgagatgacccagacgatgatcgtcaacgaccggaacctcgatgacgcc
cgtcgctacgtcgccaacggccccgaagtacatccgggcgccaactacgtcaagcgaccc
gacggccgacgtctgaaggtcaccgagaagaactgcgaggaactcgccgagaagatcgaa
cccggctgggaggtcgcccgacacctcatcgacggcgacatcatcatcttcaaccggcag
ccctcgttgcaccggatgtccatcatggcccacgaagtggtcgtgatgccgtacaagacg
ttccgcctgaacacgacggtctgtccgccgtacaacgccgacttcgacggcgacgagatg
aacatgcacgccctccagaacgaggaggcccgtgccgaggcgcgcgtcctcatgcgcgtc
caggagcagattctcagcccgcgcttcggtgagaacatcatcggcgcgattcaggaccac
atctcggggctctacctgctgaccaaccagaaccccaagttcaacgagacgcaggcgctg
gacctgctccgtgcgaccagcatcgacgaactccccgaatcggacggcaccgacgaggag
ggcaagcagtactggaccggccggacggtcttctccgaactgctgccggacggactcaac
ctcgagttcacctcctccgcgggcgacacggtgcttatcgaggacggcgaactcgtctcc
gggaccatcgacgaggacgctgccggtgccttcggcggcgaggtcgtcgacaccatctgt
aaggtctacggcaacacgcgagcgcgcgtgttcgtcaacgaggtcgccacgctggcgatg
cgctcgatcatgcacttcgggttctcgatcggtatcgacgacgaatccatcgagcgagag
gccgaagagcagatcgccgaggcaatcgacggcgcctacgaccgcgttcaggacctcatt
caggcgtaccgcgacggcgaactcgaatcgctgccggggcggacggtcgacgagaccctg
gagatgaagatcatgcagacgctcggcaaggcccgcgactccgcgggtgacatcgccgac
gaccacttcgacaacgacaacccggcggtcgtcatggccgaatccggcgcgcgtgggtcg
atgctcaacctcacgcagatggccggctgtgtcggccagcaggcggtccgcggcgagcgt
atcaaccgcggctacgaggaccgcaccctcagccacttcaagcgcaacgacctgtcggcg
gacgcccacggcttcgtcgagaactcctaccggaacggcctgacccccaaggagttcttc
ttccacgcgatgggcggccgcgaggggcttgtcgacactgcagtccggacctccaagtcc
ggttacctgcagcgtcggctcatcaacgccctctccgaactcgaagcccagtacgacggt
acggttcgggacacttccgacaccatcgtccagttcgagttcggcgaggacggcacctcg
ccggttcgggtctcctccagcgaggactacgacatcgacatcgagtccatcacggaccgc
atcgtcgacgaggagttcgccagcgaacaggagaaacaggagttcctcggcatcgaggaa
cacgaaacgaacctctcggaacacggcgagcgctggcgggctgactccgctacgggggta
gaatccgatgactga
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