Natronomonas halophila: HWV23_07130
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Entry
HWV23_07130 CDS
T07279
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
nho
Natronomonas halophila
Pathway
nho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWV23_07130 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_07130 (rpoB)
Enzymes [BR:
nho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWV23_07130 (rpoB)
Transcription machinery [BR:
nho03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HWV23_07130 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_TOP3B
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QLD85507
LinkDB
All DBs
Position
complement(1296242..1298068)
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AA seq
608 aa
AA seq
DB search
MSQGREAKVYVNGSLIGTHPDPHKLADDIREARRRGEIDEMVNVAVRDRTDEVIVNADAG
RARRPLIVVEDGEPLLSDEELEAVENDELEFEDLVDRGYVEFIDAEEEEDIYVAVDEDEL
TEDHTHLEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTRQH
LLHYPQLSIVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARSH
FFRTYEGEERRYPGGQEDRFEIPDDEVRGARGEEAYTHLDEDGLVNPETRVGENDVLLGK
TSPPRFLEEPEEMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLSKVKVRDERV
PELGDKFASRHGQKGVVGHLAPQEDMPFTQDGVVPDLILNPHALPSRMTVGHILEMLGGK
VGSLEGRRVDGTPFQGEDEDELREALVDRGYKSNGKEVMYSGITGEKIEAEIFVGVIFYQ
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLLD
ESDRELIHVCGQCGMSAVENVEQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGIAP
RIELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggaagagaagccaaagtctacgtcaacgggagcctcatcggcacccatccg
gacccgcataaactcgcagacgacatccgtgaggcacgccgccgcggtgaaatcgacgag
atggtcaacgtcgcggtacgtgaccggaccgacgaggtcatcgtcaatgccgacgccggc
cgtgcccggcggcccctcatcgtcgtcgaggacggcgaaccgctcctctcggacgaagaa
ctcgaagccgtcgagaacgacgaactcgaattcgaggacctcgtcgaccgcggctacgtc
gagttcatcgacgccgaggaggaagaggacatctacgtcgccgtcgacgaggacgaactg
accgaggaccacacgcacctcgaggtcgacccgcagctgatgttcggtatcggcgcgggc
atgattccgtaccccgaacacaacgcgtcgccgcggattacgatggggtcggggatgatc
aagcagtcgctcggtctgccgtcggccaactaccgtatccggccggacacccgccagcac
ctgcttcactatccgcaactgtccatcgtcaagacccagacgaccgaacagatcggctac
gacgaccgaccggccgcacagaacttcgtcgtcgcggtcatgtcctacgagggtttcaac
atcgaggacgccctcgtcatgaacaaggccagcgtcgaacgcgcgctcgcgcggtcgcac
ttcttccggacctacgagggcgaggaacggcgctaccccggcggtcaggaggaccgcttc
gagattccggacgacgaggtccgcggcgcacgcggcgaggaagcctacacgcacctcgac
gaggacggcctcgtcaaccccgaaacgcgtgtcggcgaaaacgacgtcctgctgggcaag
accagcccgccccggttcctcgaagagccggaggagatgggcggtctctccccgcagaag
cggcgtgagacgtcggtgacgatgcgctccggcgagtccggggtcgtcgacaccgtcacg
ctgatggaaggcgaggacggctcgaagctctcgaaggtcaaggtccgcgacgagcgggtg
ccggaactcggcgacaagttcgcctcccggcacggccagaagggtgtcgtgggccacctc
gcaccgcaggaggacatgccctttacgcaggacggcgtcgtaccggacctcatcctgaac
ccccacgccctcccgtcgcggatgacggtgggccacattctggagatgctcggcggcaag
gtcggctcgctggagggccgccgtgtcgacgggacgccgttccagggcgaagacgaggac
gaactccgcgaggcactcgtcgaccgcggctacaagtccaacggcaaggaggtcatgtac
tccgggattactggcgagaaaatcgaggccgaaatcttcgtcggcgtgattttctaccag
aagctctaccacatggtctccaacaagctgcacgcccgctcccgcgggccggtgcaggtg
ctgacccgccaacccaccgaggggcgcgcccgtgagggtggcctccgtatcggtgagatg
gaacgtgacgtcttcatcggccacggcgcggccatgacgctcaaagagcgcctgctggac
gaatccgaccgcgaactcatccacgtctgtgggcagtgtgggatgagcgccgtcgagaac
gtcgagcaacgccgagtctactgtccgaactgtgacgaggagaccgacgtccacgaagtc
gagatgagttacgcgttcaaactcctgctcgacgagatgaaggcgctgggtatcgccccg
cgaatcgaactggaggacgcagtataa
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