Natronomonas halophila: HWV23_07310
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Entry
HWV23_07310 CDS
T07279
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
nho
Natronomonas halophila
Pathway
nho03030
DNA replication
nho03420
Nucleotide excision repair
nho03430
Mismatch repair
nho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWV23_07310
03420 Nucleotide excision repair
HWV23_07310
03430 Mismatch repair
HWV23_07310
03440 Homologous recombination
HWV23_07310
03460 Fanconi anemia pathway
HWV23_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nho03000
]
HWV23_07310
03032 DNA replication proteins [BR:
nho03032
]
HWV23_07310
03400 DNA repair and recombination proteins [BR:
nho03400
]
HWV23_07310
Transcription factors [BR:
nho03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HWV23_07310
DNA replication proteins [BR:
nho03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HWV23_07310
DNA repair and recombination proteins [BR:
nho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HWV23_07310
MMR (mismatch excision repair)
HWV23_07310
DSBR (double strand breaks repair)
HR (homologous recombination)
HWV23_07310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
tRNA_anti_2
AMIN
Ssb-like_OB
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QLD85541
LinkDB
All DBs
Position
complement(1332138..1333541)
Genome browser
AA seq
467 aa
AA seq
DB search
MGAIEDIYADLEADVSEEEFREAVEAKVEQMGGLADEETAAMLIAHDLDGGEVDTIADIE
AGLEEVKFLGKIVSVGELKTFERDGDDEDGHVLNLELADESGTIRAALWDDDAVAAKEEL
ERGQVMRIKGRPKDGYNGVEVNADRVEPDEEADIDIDLDGESTIDSLTLGQSDVNLRGVV
LDSDSIRTFDRDDGSEGRVSNVTLGDETGRVRVTLWDDKADLANELDAGQSIEIIDGYVR
ERDGNLELHVGERSEIDELDEAVEFVPDATDIGSLELDEEADIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDQTGDIRVALWGDKADIDLGPGDEVFCADVEIQEGWQDDLEASAGWRS
TVTVIDGAEPDRGGDSAGLDQFADGSSPSSGSDGGSSSSGSDGESGGATEVEEETVTGTV
VQPGDPVILDTGEETVHVETDADVHLGQEVTVRGHTDDDRFIADEVF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctatcgaggacatctatgcggacctagaggccgacgtctccgaggaggagttc
cgcgaggccgtcgaggcgaaggtcgaacagatggggggactggcggacgaggaaaccgcc
gcgatgctcatcgcacacgacctcgacggcggcgaggtcgacaccatcgcggacatcgaa
gccggcctcgaggaggtgaagttcctcggcaaaatcgtcagcgtcggcgaactgaaaacg
ttcgaacgcgacggtgacgacgaggacggccacgttctgaacctcgaactcgccgacgaa
tccggcaccatccgggccgcgctgtgggacgacgacgccgtcgccgccaaggaagaactc
gaacgcgggcaagtcatgcgaatcaagggccgccccaaggacggctacaacggcgtcgag
gtcaacgccgaccgcgtcgaaccggacgaggaggccgacatcgatatcgacctcgacggc
gagtcgaccatcgactcgttgaccctcggccagtccgacgtgaatctccgcggcgtcgtc
ctcgattccgattccatccgaactttcgaccgcgacgacggcagcgagggccgcgtctcg
aacgtcacgctgggcgacgagaccggccgcgtgcgcgtcaccctctgggacgacaaggcc
gacctcgcgaacgaactcgatgccggacagagcatcgagattatcgacggctacgtccgc
gagcgggacggcaacctcgaactccacgtcggcgagcgcagcgaaatcgacgaactcgac
gaggccgtcgagttcgtccccgacgctaccgatatcggctcgctggaactggacgaggag
gcggacatcgcgggggtcgtccgttcggcggaccccaagcgcaccttcgaccgcgacgac
ggctcggaggggcaggtccgtaacatccgcgtgcaggaccagaccggcgacatccgcgtc
gcgctgtggggcgacaaggccgatatcgacctcggtcccggcgacgaggtgttctgtgcc
gacgtcgagattcaggagggctggcaggacgacctcgaagcctccgccggctggcgttcg
acggtgacggtcatcgacggcgccgaaccggaccgcggcggcgattcggcgggcctcgac
cagttcgccgacggctcctcgccctcttcgggttcggatggcgggtcgagttccagcggc
agcgacggcgagagcggcggcgcgaccgaggtcgaggaggagaccgtcaccggcaccgtc
gtccagcccggtgaccccgtgattctggacaccggcgaggagacggtccacgtcgaaacc
gacgccgatgtccacctcgggcaggaagtcaccgtccgcggccacaccgacgacgaccgc
tttatcgccgacgaagttttctga
DBGET
integrated database retrieval system
