Natronomonas halophila: HWV23_11175
Help
Entry
HWV23_11175 CDS
T07279
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
nho
Natronomonas halophila
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nho03000
]
HWV23_11175
Transcription factors [BR:
nho03000
]
Prokaryotic type
Helix-turn-helix
Other families
HWV23_11175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
GAF_2
Response_reg
HTH_10
GAF
PAS_9
PAS_4
PAS
GAF_3
Sigma70_r4
PAS_8
PAS_3
Sigma70_r4_2
HTH_11
OKR_DC_1_N
Sigma70_ECF
HTH_24
Docking
PF0610-like_N
DASH_Duo1
Motif
Other DBs
NCBI-ProteinID:
QLD86259
LinkDB
All DBs
Position
2097118..2099601
Genome browser
AA seq
827 aa
AA seq
DB search
MTSNPVLRQDPIIVLHVDDDPQMRTLVKYSLERVNCAFTVRTADGPDAALEELDDDVECV
ISDYEMPGMNGLELLDEVRAERPDIPFILLTGKGSEDVAGEAVTAGLTDYFQKSDIAKQF
PVLAQRIETAVEGERAEVSYRELFEKAVDGLALNDPETGSFVDANPAFRDILGLNQAELM
AMSISDIRSVPPQDEQDPTLVEYLRRATAEGTTSTEECCRRPDGERFWVELQFKPIEVKG
HSLVLTQAREITERKRYEQTLSALHSAVTDIVGAEQSRQVTGSVLSAVEDLLAADRAAVF
RHAPAENWLEVVDATSLPSVIDELPLDPSQPPARAFIDGTTITVDGASVFEHASDDADDG
RTLFVPIGSAGVLAAGYDEATSFDGDDREFAEILANAAAAAFERIEKEREIDSSREELRE
QTAELQRLERINAAFRELNDTLLSAETREEVFEVVCEQLSGIEGVKLAWIGARTDSDALE
PQVWAGDIPQYLDSADFEPGSSDEPAAVAARTGDAVRVANTATDLQRKPWKRTALSHGVE
SAMALPIEAEGVTFGVLSVLAGDRAAFSGQFADLLSAVASSVGETVHAIEQRQGIRASDT
VELTFEITADDHPLKRLAADAGCELEVTGVISEPDDTCRLFVTVHGESPSHLQTVAEEMN
AVRRVTIATEDDDGGAVELHLEVPLLGVELNQYAVRITRLLATADSVRATLELAHPQDVR
DVAAAIRERYPSASLRTKRTNTEERSDYDRLLAFRDSLTPRQREVVHMAYLNGYFESPRR
CTGEELGEKLGISAQAVYQHIRSAERRLFDEAFRQILTVSTPDDPPA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaatcccgtcctgcggcaggacccgataatcgttctgcacgtcgacgacgac
ccacagatgcggaccctcgtgaaatacagcctcgaacgcgtaaactgcgcgttcaccgtc
cgaacagccgacggtcctgacgctgcactcgaggaactcgacgacgacgtcgagtgtgtc
atctcggattacgagatgccggggatgaacgggctcgaactcctcgatgaagtacgggcc
gagcggccggatatcccctttatcctcctgaccgggaagggctcggaggacgtcgcaggc
gaggcggtgacggccggcctgacggattacttccagaagtcggatatcgccaagcagttc
ccggtgttggcccagcgtatcgaaaccgcagtcgaaggcgagcgcgcggaagtgagctac
cgggaactgttcgagaaggccgtcgacggcctcgcgctgaacgaccccgaaaccggttcc
ttcgtcgatgccaaccccgctttcagggacatcctcgggctgaatcaggcggaactgatg
gcgatgagtatctcggatattcggagcgtcccgccacaggacgagcaggacccgacgctg
gtcgagtacctgcgacgggcgacggcggaggggacgacaagcaccgaagagtgctgtcgg
cgccccgacggcgagcgcttctgggtcgaactccagttcaaacccatcgaggtgaagggc
cactcgctggtcctgacgcaggcgcgggaaatcaccgaacgcaagcggtacgaacagacg
ctatcggcgctgcactcggcggtgaccgacatcgtcggcgccgaacagtcccggcaggtc
accggcagcgtcctctcggcagtcgaggacctgctcgcggccgaccgggcggcggtgttc
cgccacgcgccggccgaaaactggctggaagtcgtcgacgccacgtcgctaccaagtgtt
atcgacgaactcccgcttgacccctctcagccgcccgctcgcgccttcatcgacgggacg
actatcaccgtcgatggggcctcggtgttcgaacacgcttcggacgatgctgacgatggc
cggacgctgttcgtacccatcggctcggccggcgtgctcgcggccggctacgacgaggcg
acgtccttcgacggcgacgaccgggagttcgcggagatactcgcaaacgccgcggcggcg
gccttcgagcgcatcgaaaaggaacgggaaatcgattcgagtcgggaggaactccgcgag
cagaccgcggaactccagcggctcgaacgcatcaacgccgcgttccgcgaactcaacgac
accctgttgagcgccgagacgcgcgaggaggtcttcgaggtggtctgcgagcagttgagc
ggcatcgagggcgtcaaactcgcctggatcggcgcgcggaccgactcggacgccctcgaa
ccgcaggtatgggccggcgatatcccccagtatctcgacagcgccgatttcgaacccggg
tcgagcgacgaaccggcggccgtcgcggcccggaccggcgacgcggttcgcgtcgcgaac
acggcgacggacctccagcggaaaccctggaagcggacggccctctctcacggcgtcgag
tcggcgatggcgcttcccatcgaggccgagggcgttaccttcggcgtgctctccgtcctt
gcgggggatagagcggcgttcagcggccagttcgcggacctgctgtcggcggtcgcgtcc
tcggtcggtgaaacggtccacgccatcgagcaacggcagggcatccgggcgtccgatacc
gtcgaactcaccttcgaaatcacggccgacgaccaccccctcaaacgcctcgcggccgac
gccggctgtgaactggaggtcaccggcgtcatctccgagccggacgatacctgtcggctg
ttcgttaccgtccacggtgagtcgccgagccatctccagactgtcgccgaggaaatgaac
gctgtccgtcgcgtgacgattgcgaccgaggacgacgatggcggcgccgtggaactgcac
ctcgaagtgccgctgttaggcgtggaactgaaccagtatgcggttcgcatcacgcgcttg
ctcgcgaccgcggactccgtccgggcgacgctggaactcgcccacccgcaggacgttcgg
gacgtcgccgccgccatccgggagcggtatccgtcggcgtcgctgcgcacgaaacgcacc
aacaccgaggaacgcagcgactacgaccgcctgctcgcgttccgtgactcgctcacgccg
cgccagcgggaagtcgtccacatggcgtatctcaacggctacttcgaatcgccgcgccgc
tgtacgggcgaggaactcggcgagaaactcggtatctccgcacaggccgtctaccagcac
atccggagcgccgaacgccgcctgttcgacgaggcgttccgccagattctgacggtatcg
acgcccgacgacccgcccgcatga
DBGET
integrated database retrieval system
