Natronomonas halophila: HWV23_11710
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Entry
HWV23_11710 CDS
T07279
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nho
Natronomonas halophila
Pathway
nho03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV23_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nho03021
]
HWV23_11710
Transcription machinery [BR:
nho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HWV23_11710
Prokaryotic type
Archaeal type
TFB
HWV23_11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Anti-TRAP
Sigma70_r4
Zn_ribbon_LysW
HTH_Tnp_ISL3
DZR
UPF0547
Zn_ribbon_Nudix
DZR_2
Zn_ribbon_PaaD
Zn_ribbon_FGT1_1
Zn_ribbon_tTFIIB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QLD86362
LinkDB
All DBs
Position
2193524..2194486
Genome browser
AA seq
320 aa
AA seq
DB search
MSKHTRTRTTETETESERDEEEVGCPECGGKLSADTEHGETVCRDCGLVVEEDEIDRGPE
WRAFDSAEKDEKSRVGAPTTNMMHDKGLSTNIDWRDQDAYGNSLSSNQRQKMQRLRKWNE
RFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDENLLPGRSIEGVSTA
SVYAAARQAGVPRSLDEVAGVSRVEKSEIARTYRYVVRELGLEVQPADPESYVPRFASDL
ELSDEAENRARKLLQNAKEQGVHSGKSPVGLAAAAVYAASLLTNEKTTQAAVSEVADISE
VTIRNRYHELLEAEQDLAVA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcacactcgaacacgaacgaccgagacggaaacggaatccgaacgagacgaa
gaggaggtcggctgtcccgaatgcggcgggaaactgagcgccgacaccgaacacggggag
accgtctgccgcgattgcggtctcgtcgtcgaggaggacgaaatcgaccgcggacccgaa
tggcgcgccttcgacagcgccgagaaggacgagaaatcgcgcgtcggtgcccccaccacc
aacatgatgcacgacaaggggctctcgacgaacatcgactggcgagaccaggacgcctac
ggcaactcgctttcgtccaaccagcgccagaagatgcagcgcctccgcaagtggaacgag
cgcttccggacgcgtgactccaaagagcggaacctcaagcaggcgctgggcgaaatcgac
cggatggcctccgccctcggcctcccggacaacgtccgagagaccgcttcggtcatctac
cgccgcgcgctcgacgagaacctcctgccgggccgctccatcgagggcgtctcgacggcg
tcggtctacgccgccgcccggcaggccggcgttccccgaagcctcgacgaagtcgccggc
gtctcccgcgtcgagaagagcgaaatcgcacgtacctaccgctacgtggtccgcgaactg
ggtctcgaagtccaacccgccgaccccgaaagctacgtaccccgcttcgccagcgacctc
gaactctccgacgaggccgaaaaccgcgcccgcaaactcctccagaacgccaaagagcag
ggcgtccactccggcaaatcgcccgtcggcctcgcggccgctgcggtctacgccgcatcc
ctcctgaccaacgagaaaaccacgcaggccgccgtcagcgaagttgccgacatctccgag
gtcaccatccggaaccggtaccacgaactgctcgaagccgagcaggacctcgccgtagct
tag
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integrated database retrieval system
