Natronomonas halophila: HWV23_13255
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Entry
HWV23_13255 CDS
T07279
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nho
Natronomonas halophila
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nho03400
]
HWV23_13255
DNA repair and recombination proteins [BR:
nho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWV23_13255
Archaeal homologous recombinant proteins
HWV23_13255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_21
SMC_N
AAA_27
AAA_29
AAA_13
ABC_ATPase
MscS_porin
COG6_N
Baculo_PEP_C
CCDC113_CCDC96_CC
ATG17_like
SbcC_Walker_B
AAA_16
ABC_tran
ZnF_RZ-type
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QLD86652
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All DBs
Position
2482442..2485105
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AA seq
887 aa
AA seq
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MRFDRIRLQNFKCYADSDLSLRSGVTVIHGVNGSGKSSLLEACFFALYGTDAIDGTLDDV
ISNDAEEMTVELWFTHNGAEYRVEREVKLRGDSAQTTTCLLETPEGTIEQVTDVENHIES
LLRMDAEAFVNCAYVRQGEVNKLINASPSDRQDMIDDLLQLGKLEEYRERASKARVGVGR
VRDDKQGALSQVEEQIAEKEEQNLHERLNGLKSDLAEINEDIEEKTEQRDAAKERLEEAN
AILEEFEQRREEIADLETEIEELTSTIADAETEREKLAEQVRTLREEADELREEMDEAVA
ETDLEEADPDAVDERLTELAERADEIRDDIEERRLEAQEHAGTAETKRERAAELREQASG
AGEEADALETEVEEERDKLRERREDLADLDEEIEGLREELDEAPVARDEIDVHREDVGKE
LTEAKERVAELTASLENAEETVAEAERLLEEGKCPECGQPVDDSPHVESIDEDRERVSEL
ETELETAEARVEELEEKREQAEALAETASELSRLEDSRENATQLIDQKVESVEEKADRVE
ELREEAEEYEEAADEADEAAEEAESKADEARQAIGELNQQKASIDESRERLERIEELLEE
IDDTEQRIEQLRERRDNKEELNEQRRERLSDKRERKAELEDEFDESALEKAEAQKKKAEG
YLEDVEPYLDDQRETRDELQNKIGAVENEIEELENLRERREDLQQTVDRLESLYDEAHDL
QEMYTELRADLRQRNVEKLEAMLNETFDLVYQNDSYARIELDGDYELTVYQKDGTPLDPD
QLSGGERALFNLSLRCAIYRLLSEGIEGQAPTPPLILDEPTVFLDSGHVSKLVELVESMT
DHGVDQIVVVSHDEELVGAADDLIAVHKDPTTNRSSVERSATVEALS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgaccggattcgcctacagaacttcaagtgctacgccgatagcgacctctcg
ctgcgctcgggcgtgacggtcatccacggcgtcaacggcagcgggaaatcctccctgctt
gaggcgtgtttcttcgccctctacggcaccgacgccatcgatggcacgctcgatgacgtc
atctcgaacgacgccgaggaaatgaccgtcgaactgtggttcacccacaacggcgccgaa
taccgcgtcgaacgtgaggtcaaactccgcggcgacagcgcccagaccacgacctgtctg
ctggaaacccctgagggaaccatcgagcaggtcaccgacgtcgaaaaccacatcgagagc
ctcctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccggcagggcgaggtg
aacaaactcatcaacgcctcgccgagcgaccgacaggacatgatcgacgatctcctccaa
ctcggcaaactggaggagtaccgcgaacgggcgagcaaggcccgcgtcggcgtcggccgc
gtccgagacgacaaacagggtgcgctctcacaggtcgaagagcagatcgccgagaaggaa
gagcagaacctccacgaacggctcaatggcctcaaaagcgacctcgcagagataaacgaa
gacatcgaggagaaaaccgaacagcgcgatgcggccaaagaacgcctcgaggaggcgaat
gccatcctcgaagagttcgaacagcgccgcgaggaaatcgcggacctcgaaaccgaaatc
gaggagctcacttcgaccatcgccgacgccgaaaccgaacgcgagaaactggccgagcag
gtcaggacgctccgagaggaagcggacgaactgcgggaggagatggacgaggcggtcgcc
gagactgacctcgaagaggccgaccccgatgccgtcgacgaacggctcacggaactggcc
gaacgggccgacgagattcgcgatgatatcgaggagcggcggctggaagcccaagaacac
gctggtaccgccgaaacgaaacgcgagcgggccgcggaactccgcgagcaggccagcgga
gcgggggaggaagcagacgccctcgaaaccgaagtcgaggaggagcgcgacaaactccga
gagcgtcgcgaagacctcgcggacctcgacgaggaaatcgaggggctgcgcgaggaactg
gacgaggcaccggttgctcgcgacgaaatcgacgtccaccgcgaggacgtcggcaaggag
ctaaccgaagcgaaagagcgggtcgcggaactcaccgcgagcctcgaaaacgccgaggag
acggtcgccgaagcagagcgcctgctggaggagggcaaatgccccgaatgcggccaaccg
gtcgacgactcgccgcacgtcgaatccatcgacgaggaccgcgaacgggtctcggaactc
gaaacggaactcgaaaccgccgaggcgcgcgtcgaagaactcgaagaaaaacgcgagcag
gccgaagcgctggccgaaaccgcttcggaactgtcgcgactcgaagattcccgggagaac
gccacccaactcatcgaccagaaggtcgaatcggtcgaggagaaggctgaccgagttgag
gaactccgcgaggaagccgaagagtacgaggaggccgccgacgaagccgacgaagcggcc
gaggaagcggaatcgaaggccgacgaggcccgacaggctatcggcgagttgaaccagcaa
aaggcgtccatcgacgagtcccgagagcgtctggagcgcatcgaggaactgctcgaagaa
atcgacgacaccgaacagcgaatcgagcagttgcgcgagcgccgggacaacaaggaggaa
ctcaacgaacagcgccgcgagcgactctccgacaagcgtgagcggaaggccgaactcgaa
gacgagttcgacgaatctgcccttgagaaggccgaagcccagaaaaagaaggccgagggc
tatctggaggacgtcgaaccgtatctggacgaccagcgcgagacgcgcgacgaactccag
aacaaaatcggcgcggtcgaaaacgaaatcgaggaactggagaacctccgcgaacggcgc
gaggacctccagcagaccgtcgaccgcctcgaatccctctacgacgaggcccacgacctc
caggagatgtacacggaactgcgggccgacctccgacagcggaacgtcgagaaactggag
gcgatgctcaacgagacgttcgacctcgtctaccagaacgattcgtacgcgcgcatcgag
ttggacggcgactacgagttaaccgtctaccagaaggacggcacgccgctggaccccgac
cagttgtcgggcggcgagcgcgcgctgttcaatctctcgctgcgatgtgccatctaccgc
ctcctctcggagggcatcgagggacaggccccgacgccgccgctcatcctcgacgaaccg
acggtcttcctcgattcgggccacgtctcgaaactcgtggaactggtcgaatcgatgacc
gaccacggcgtcgaccagatcgtcgtcgtcagccacgacgaggaactggtcggtgcggcc
gacgacctcatcgccgttcacaaggacccgacgacgaaccggtcctcggtcgaacgttcg
gcgaccgtcgaggcgctgtcctaa
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