Natronomonas halophila: HWV23_14590
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Entry
HWV23_14590 CDS
T07279
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nho
Natronomonas halophila
Pathway
nho04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HWV23_14590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nho03019
]
HWV23_14590
03009 Ribosome biogenesis [BR:
nho03009
]
HWV23_14590
04131 Membrane trafficking [BR:
nho04131
]
HWV23_14590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nho04147
]
HWV23_14590
Messenger RNA biogenesis [BR:
nho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HWV23_14590
Ribosome biogenesis [BR:
nho03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HWV23_14590
Membrane trafficking [BR:
nho04131
]
SNARE
SNARE associated proteins
Others
HWV23_14590
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HWV23_14590
Exosome [BR:
nho04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWV23_14590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
RNA_helicase
NPHP3_N
AAA_28
IstB_IS21
Mg_chelatase
AAA_17
AAA_7
AAA_18
AAA_lid_PRS2_C
Sigma54_activat
ABC_tran
AAA_3
ATPase
PhoH
DUF815
AAA_24
Parvo_NS1
AAA_30
TsaE
NB-ARC
AAA_11
SLFN-g3_helicase
NACHT
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QLD86901
LinkDB
All DBs
Position
2750174..2752399
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPAGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEERGQVVVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GRKEILQIHTRGMPLADDVSLDHMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DVPPSLIDRMIIKRSDFRGALNEVDPSAMREVLVELPKVSWDDVGGLTEPKEQVQESVEW
PMNQPEKFDRFGIEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGGETGSNVSERVVNQLLTELDGLEEMGEV
MVIGATNRPDMIDPALIRSGRFDRLVMIGEPDVDGREQILRIHTEDMPLSPDVSLRELAE
ITGGYVGSDLESIAREAAIEALREDDDAEEVGMSHFRQALDSVRPTISDDIREYYEQIEE
EFRGGGAEAGHRQGGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggttcaactagaggtcgcgaaggcctacccgaacgactcgggccggggcatc
gcgcgcctcgaccccgacacgcttctgcatctgaagctgtctccgggagacatcatcgaa
attgagggtgcagacacgaccgcggcgaaggtctggcgggccgaccggcaggactggaac
accgatacggtccgcatcgacgggttcacgcgccagaacgccgatgtcggtatcggcgag
cgcgtgacgattcggaaggccgaggcgacgaaagcggacaaactcgtcctcgcgccgccc
gaggaggcgtcggtccagttcggctccgacgccgccggcatggtcaaacgccagattctc
aagcggccggtcgtcgaacgcgacatcgtacccgtaatgagttcgacgaaccacccgttc
atgcggtcgcccggacaggcgattccgctcatcgccgtcgagacggaaccggacggggtc
tgtctcatcaccgaggacaccgaggtcgaactccgcgaggagccaatcagcggcttcgag
aagaccggtgggggaattacctacgaggacatcggcggcctgcaaaacgagattcagcgg
gtccgcgagatggtcgagttgccgatgaaacacccccagatattcaagaaactcggcatc
gagccgcccgcgggggtgttgctccacggcccgcccgggaccggcaagaccctgctggcg
aaggccgtcgccaacgagacgtcggcgtcgttcttctccatcgccggccccgagattatc
tcgaagtactacggcgaatccgaacagcaactccgtgaaatcttcgaggacgcgaccgag
gagtcaccgtctatcatcttcatcgacgagttggactccatcgcgcccaaacgcgaggac
gtcaccggcgaggtcgaacgccgtgtcgtcgcccaactgctgacgatgatggacggcctc
gaagagcgcgggcaggtcgtcgtcatcgctgcgaccaaccgggtcgactcggtcgacccc
gcgctccgccgtcccggccgcttcgaccgcgaaatcgaaatcggcgtccccgacgagacc
ggccgcaaggaaatcctccagattcacacccgcgggatgccgctggccgacgacgtctcg
ctggaccacatggccgacgagacccacggcttcgtcggtgccgacatcgagagcctaacc
aaagaagccgcgatgaaggccctgcggcgttacctcccggaaatcgacctcgacgaggag
gacgttccgccgagtctcatcgaccgtatgataatcaagcggtcggacttccgcggcgcg
ctcaacgaggtcgacccctcggcgatgcgggaggtgctggtcgaactccccaaggtttcc
tgggacgacgtcggcggcctcaccgaacccaaagagcaggtacaggagtccgtcgagtgg
ccgatgaaccaaccggagaagttcgaccgtttcggtatcgaaccgcccgcgggcgtccta
ctctatggcccgcccggtaccgggaagacgctgatggccaaggccgtcgccaacgagacc
aacgctaacttcatctcggtgcgcggcccgcaactcctctcgaagtgggtcggcgaaagc
gagaaggccatccgccagaccttccggaaggcccggcaggtttcgccgacggtcatcttc
ttcgacgagctcgacagcctcgcgccgggccgcggcggcgaaaccggctcgaacgtctcc
gagcgggtcgtcaaccaactgttgaccgaactcgacggcctcgaggagatgggcgaggtg
atggtcatcggtgcgaccaaccgccccgacatgatcgaccccgcgctcatccgttccggg
cggttcgaccgcctcgtcatgatcggcgaacccgacgtcgacggccgcgagcagattctc
cgcatccacaccgaggacatgccgctgtcgccggacgtcagcctccgtgaactcgccgaa
atcaccggtggctacgtcggttcggacctcgaatccatcgcgcgagaggcggccatcgag
gccctccgcgaggacgacgacgccgaggaagtcgggatgagccacttccggcaggcgctc
gattcggtccgcccgaccatctccgacgacatccgtgagtactacgagcagatcgaagag
gagttccgcggcggcggtgccgaggccggacaccggcagggcggcggccgtatcggtttc
caatag
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