Nocardia huaxiensis: H0264_09505
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Entry
H0264_09505 CDS
T07784
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H0264_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhu03400
]
H0264_09505
Enzymes [BR:
nhu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H0264_09505
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H0264_09505
DNA repair and recombination proteins [BR:
nhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H0264_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Zn_ribbon_TFIIB
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QLY32459
UniProt:
A0A7D6ZJE2
LinkDB
All DBs
Position
2157580..2158446
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AA seq
288 aa
AA seq
DB search
MPELPEIVALEQFLVEHAVGAVVGRVDIAALSVLKTFDPPATALSGRDVTGVGHWGKHLG
IDCDGLWLITHLSRAGWLRWIDEPSAAPPKPGKGPLALRVNLFTPDGSTPAFDLTEAGTK
KRLAVWITKEPLQVPSIARLGPDALAVSEAEFGELLHGTSQRVKTALTDQGLIAGIGNAY
SDEILHTAKLSPFASTRSLDADQTSRLYSAMRASLGDAIERSVGQDAARLKGEKRSGLQV
HGRTGLPCPVCGDTVREVAYVDKSFQYCPTCQTGGKILADRRMSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgccggaaatcgtggctctcgaacagttcctggtcgagcatgccgtggga
gcggtggtggggcgggtcgatattgcggcgctgagcgttctgaagactttcgatccgccg
gccaccgcgctgtccgggcgggatgtgaccggggtggggcactgggggaaacatctcggg
atcgactgcgacgggttgtggttgatcacccatctgtcgcgggcgggatggctgcggtgg
atcgatgaaccctccgccgcgccgccgaaaccggggaaaggcccgctggccctgcgggtg
aacctgttcacgccggacgggtccaccccggccttcgacctcaccgaggcgggcaccaag
aagcggctggcggtgtggatcaccaaggaaccgctccaggtgcccagcatcgcgcggctc
ggccccgacgccctggcggtgagcgaggccgagttcggtgaactcctgcacgggacttcg
cagcgggtgaagaccgcactcaccgatcagggcctgatcgccgggatcggcaacgcctac
tccgacgaaatcctgcacaccgccaaactctcgcctttcgcgagcacccgaagcctcgac
gccgaccagacgtcgcgcctgtactccgccatgcgcgccagcctcggcgacgccatcgag
cgatcggtaggccaggacgcggcccgcctcaagggcgagaagcgatccggcctacaggtg
cacggccgcaccggcctgccctgcccggtatgcggcgacaccgtccgtgaagtcgcctac
gtggacaagtccttccagtactgcccgacctgccagaccggcggcaagatcctcgccgat
cgccgcatgtcgcggctgctgaaatag
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