Nocardia huaxiensis: H0264_12045
Help
Entry
H0264_12045 CDS
T07784
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H0264_12045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhu03019
]
H0264_12045
03009 Ribosome biogenesis [BR:
nhu03009
]
H0264_12045
Enzymes [BR:
nhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H0264_12045
Messenger RNA biogenesis [BR:
nhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H0264_12045
Ribosome biogenesis [BR:
nhu03009
]
Prokaryotic type
rRNA helicases
H0264_12045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QLY32873
UniProt:
A0A7D6VDZ8
LinkDB
All DBs
Position
2700230..2702029
Genome browser
AA seq
599 aa
AA seq
DB search
MSTSPADSVPSDDERDVNGPSFADLGIDDRILRAIADVGYESPSPIQAATIPPLLEGADV
VGLAQTGTGKTAAFAIPILMGLQGSGKQPQALVLAPTRELAIQVAEAFQKYSVHMPGVHV
LPIYGGQNYAVQLNGLKRGAQVVVGTPGRVIDHLERGTLDLTQLQFLVLDEADEMLKMGF
QEDVERILRDTPGQKQVALFSATMPTAIRKISKQYLNDPTEITVKTKTATNTNITQRWVM
VSYQRKLDALTRILEVESFEAMIIFVRTKQATEELAEKLRARGYSAAAINGDIAQAQRER
TIGQLKSGVLDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRTGEAL
LFVAPRERRLLDAIERATRQQVTEMQLPSVEDVNAQRVQKFGDTITENLASANLPLFRKL
IEDYEREHNIPLVDIAAALAIGSYDGDNFFMEPDPEPAPRRERDRDRAPRDSDDRGPRER
RDAGPSRHRQTGAELATYRISVGKRHKVAPGAIVGAIANEGGLRRSDFGHISIRPDHSLV
ELPADLSSETLNALSRTRISGQLIQLQLDQGPPRGGMNRNPRRDSRSEKPRYERRKPRA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcaccggccgacagcgttcccagcgacgacgagagggacgtgaacggcccg
tccttcgccgatctcggcatcgatgaccgcattctgcgggccatcgccgatgtcggctac
gaatcgccgtcgccgattcaggcggcgacgattccgccgctgctggagggcgcggacgtg
gtgggtctcgcgcagaccggtaccggcaagaccgcggccttcgccatcccgatcctcatg
ggtctgcaaggttccggcaaacagccgcaggcgctggtgctcgctcccacccgtgagctg
gcgattcaggtcgccgaggcgttccagaagtactcggtgcacatgcccggcgtgcacgtg
ctgcccatctacggcggccagaactacgcggtgcagctcaacggtctcaagcgcggcgcg
caggtcgtggtcggtacgccgggacgtgtgatcgatcacctcgagcgcggcaccctcgac
ctgacccagctgcagttcctggtgctggacgaggccgacgagatgctcaagatgggcttc
caggaggacgtcgagcgcatcctgcgcgacactccgggccagaagcaggtggcgctgttc
tcggcgaccatgccgaccgctatccgcaagatctccaagcagtacctgaacgatccgacc
gagatcaccgtcaagaccaagacggccaccaacaccaacatcacgcagcgctgggtgatg
gtgtcgtatcagcgcaagctggacgcgctgacccgcatcctcgaggtcgaatccttcgag
gccatgatcattttcgtgcgcaccaagcaggccaccgaggagctggccgaaaagctgcgc
gcgcgtgggtattccgcggccgccatcaatggcgatatcgcgcaggcgcagcgtgagcgc
accatcggccagctgaagtcgggcgtgctcgacattctcgtcgccaccgatgtggcggcg
cgcggcctggacgtggaccgcatctcgcacgtggtcaactacgacattccgcacgacacc
gagtcgtacgtgcaccgcatcggccgcaccggccgcgcgggccgcaccggtgaggcgctg
ctgttcgtggccccgcgtgagcgccggctgctggacgccatcgagcgcgccacccgccag
caggtcaccgaaatgcagctgcccagcgtggaggacgtgaacgcgcagcgggtgcagaag
ttcggtgacaccatcaccgagaacctggcctcggcgaacctgccgctgttccgcaagctc
atcgaggattacgagcgcgagcacaacattccgctcgtggatatcgcggcggcgctggcc
atcggctcctacgacggcgacaacttcttcatggagcccgacccggagcccgcgccccgt
cgtgagcgcgaccgtgaccgcgccccccgcgattccgacgatcgcggcccccgcgagcgt
cgcgacgccggccccagccgccaccgtcagaccggcgccgagctggccacctaccgcatc
tcggtcggcaagcgccacaaggtcgccccgggtgcgatcgtcggcgccatcgccaacgag
ggcggcctgcgtcgcagcgacttcggtcacatcagcatccgccccgaccacagcctggtc
gaactccccgcggatctatcctccgaaaccctgaatgccttgagccgcacccggatcagc
ggccagctcatccagctccagctggaccagggcccgccgcgcggcggcatgaaccgcaac
ccgcgccgcgactcccgcagcgagaagccccgctacgaacgccgcaagccgcgcgcgtag
DBGET
integrated database retrieval system
