Nocardia huaxiensis: H0264_16765
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Entry
H0264_16765 CDS
T07784
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03030
DNA replication
nhu03430
Mismatch repair
nhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H0264_16765 (dnaE)
03430 Mismatch repair
H0264_16765 (dnaE)
03440 Homologous recombination
H0264_16765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhu03032
]
H0264_16765 (dnaE)
03400 DNA repair and recombination proteins [BR:
nhu03400
]
H0264_16765 (dnaE)
Enzymes [BR:
nhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H0264_16765 (dnaE)
DNA replication proteins [BR:
nhu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H0264_16765 (dnaE)
DNA repair and recombination proteins [BR:
nhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H0264_16765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Stork_head
Motif
Other DBs
NCBI-ProteinID:
QLY33662
UniProt:
A0A7D6VG30
LinkDB
All DBs
Position
3764635..3768183
Genome browser
AA seq
1182 aa
AA seq
DB search
MSSSGSFVHLHNHTEYSMLDGAAKITPLFKEANRLGMTAVGMTDHGNMYGASEFYNSAKK
NGIKPIIGIEAYIAPESRFNTKRVQWGDPSQKSDDVSGSGAYTHMTMVAENATGLRNLFK
LSSLASIEGQLGKWARMDADIIAEHAAGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQ
EIFGPENFFLEIMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVHEHDAANHEALLC
IQTGKTLSDPTRFKFDGSGYYLKSAEEMRAIWDAEVPGACDNTVLIGERVQSYDDVWAHR
DRMPIFPVPEGETQASWLRHEVMKGLDRRFPNGVPPEYITRADYEIDVVNEMGFPAYFLI
VADLITYARSVGINVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARVQFGQPGFAIADQISK
ALPPPIMAKDIPLSGIMDPEHERYKEAAEVRELINTNPDVNKIYETARGLEGLIRNAGVH
ACAVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDCLQN
MKANRGIDLDLDTLPLEDKATYELLARGDTLGVFQLDGGAMRDLLRRMQPTGFEDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKDILRDTYGLIVYQEQIMQIAQK
VAGYSLGRADILRRAMGKKKAEVLEAEFEGFEKGMMENGFSKPAIKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIQVLPPDV
NESELEFASVGNDIRFGMGAVRNVGANVVASIIQARKEKSKFTDFSDYLNKIDAVACSKK
VAESLIKAGAFDSLGHPRKGLMLVHSDAIDAVMSTKKAEAIGQFDLFGGLDDGDDSVASV
FNVKVPDEEWDTKHKLALEREMLGLYVSGHPLHGVEHVLSNQSDTSIPTILEGDVKDGAQ
VTVGGILSTVTRRINKNGLAWASCQLEDLSGGIEVLFFPQSYSVYGMDVVEDAIVLVKAR
VSMRDDRVSLIANDLVVPDLSHIGVEKPVSVTIPTRLCTPDKIGALKRVLSSHPGTANVH
IRHVGSRERTTVLKVADNLRVSPSSALMGDLKALLGPGCMAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcatcgggatcattcgttcacctgcacaatcacaccgagtactcgatgctcgac
ggcgcggcgaagatcacgcctctgttcaaagaggcgaaccggctgggcatgaccgccgtc
ggcatgaccgaccacggcaatatgtacggcgcctccgagttctacaactccgccaagaag
aacggcatcaagccgatcatcggcatcgaggcctacatcgcgccggaatcgcggttcaac
accaagcgtgtgcagtggggcgacccgtcgcagaagagcgacgacgtgtccggttccggt
gcgtacacgcatatgacgatggtggcggagaacgcgaccggtctgcgcaacctgttcaag
ctgtcgtcgctggcgtcgatcgagggccagctcggcaagtgggcgcgtatggacgccgac
atcatcgccgagcacgccgccggcatcatcgccaccaccggctgcccctcgggcgaggtg
cagacccgcctgcgcctgggccacgagcgcgaggccctcgaagccgcggccaagtggcag
gagatcttcggcccggagaacttcttcctcgagatcatggaccatggcctgtccatcgag
cgccgggtgcgcgagggcctgctcgaggtcggcaagaagctgggcattccgccgctggcc
accaacgactgccactacgtgcacgaacacgacgccgccaatcacgaggcgctgctgtgc
atccagaccggcaagaccctctcggatccgacccgcttcaagttcgacggctccggctac
tacctcaaatccgccgaggagatgcgcgccatctgggacgcggaggtccccggcgcgtgc
gacaacacggtcctcatcggcgagcgcgtccagtcctacgacgacgtctgggcgcaccgc
gaccgcatgcccatcttcccggtccccgagggcgagacgcaggccagctggctgcgccac
gaggtgatgaagggcctggaccgccgtttccccaatggcgttccgcccgaatacatcacg
cgcgccgactacgagatcgacgtcgtcaacgagatgggcttcccggcctacttcctcatc
gtcgccgacctcatcacctacgcgcgttcggtcggcatcaatgtcggcccgggtcgaggt
tcggcggccggttcgctggtcgcctacgccatgggcatcaccaatatcgacccgatcccg
cacggcctgctgttcgagcgattcctcaatcccgagcgcgtgtccatgcccgatatcgat
atcgacttcgacgatcgccggcgcggtgaaatggtccgctacgccaccgagaagtggggc
agcgatcgggtcgcccaggtgatcaccttcggcaccattaaaaccaaagcggcgctgaag
gactcggcccgcgtccagttcggccagcccggcttcgccatcgccgatcagatctccaag
gcgctgccgccgccgatcatggccaaggacattccgctgtcgggcatcatggatcccgag
cacgagcggtacaaggaagccgccgaggtccgggagctcatcaacaccaacccggacgtc
aacaagatctacgagaccgcgcgcggcctcgagggcctgatccgcaatgccggcgtgcac
gcctgcgcggtcatcatgtcctccgaaccgctcaccgacgccatcccggtgtggaagcgg
gcgcaggacggcgccatcatcaccggctgggactacccgagctgtgaggccatcggcctg
ttgaagatggacttcctgggtctgcgcaacctcaccgtcatcggtgactgcctgcagaac
atgaaggccaaccgcggcatcgacctcgacctcgacacgctgccgctggaggacaaggcc
acctacgaattgctcgcgcgcggcgacactctcggcgtgttccagctcgacggtggcgcc
atgcgcgacctgctgcgccgcatgcagcccaccgggttcgaggacatcgtggccgtgctc
gcgctgtaccgccccggccccatgggcatgaacgcccacaatgactacgccgaccgcaag
aacgggcggcaagaggtcaagcccatccacccggagctggaagaaccgctcaaggacatc
ctgcgtgatacctacggcctgatcgtgtatcaggagcagatcatgcagatcgcgcagaag
gtggccgggtactcgctcggccgagcagacattctgcgccgcgccatgggtaagaagaag
gccgaagtcctcgaggccgaattcgaaggcttcgagaagggcatgatggagaacggcttc
tccaagcccgccatcaaggcgctgtgggacacgattcttccgttcgccggatacgcgttc
aacaagtcgcatgccgccggctacggtctggtctccttctggaccgcgtacctcaaggcc
aactatcccgccgagtacatggccggtctgctcacctccgtcggtgacgacaaggacaag
gccgccgtctacctggccgactgccgccgcctgggtatccaggtgctgccccccgacgtc
aacgagtccgaactcgaattcgcctccgtcggcaacgacattcgcttcggtatgggcgcg
gtgcgcaatgtcggcgcgaacgtggtggcctcgatcatccaggcgcgcaaggagaagtcg
aagttcaccgacttctccgactacctgaacaagatcgacgccgtggcctgctccaagaag
gtcgccgaatccctcatcaaggcaggcgctttcgactcgctcgggcatccgcgcaagggc
ctcatgctggtgcactccgacgccatcgacgcggtcatgtcgaccaagaaggcggaggcc
atcggccagttcgacctcttcggcggcctcgacgacggcgacgattcggtggccagcgtc
ttcaatgtgaaggtgcccgacgaggaatgggacaccaaacacaagctcgcgctcgaacgg
gaaatgctgggcctctacgtgtccgggcatccgctgcacggcgtcgagcacgtgctgtcc
aaccagtccgacacctcgatcccgaccattctggaaggcgacgtcaaggacggcgcgcag
gtgaccgtcggcggcatcctctccacggtgacccggcgcatcaacaagaacggtctggcc
tgggcatcgtgtcagctggaggatctgtccggcggcatcgaggtgctgttcttcccgcag
tcctactcggtgtacggcatggatgtggtcgaggacgccatcgtgctggtgaaggcgcgc
gtcagcatgcgcgacgaccgcgtctcgctcatcgccaatgaccttgtggtgccggatctt
tcgcatatcggcgtggagaagccggtatcggtcaccatcccgacccgcctgtgcacgccg
gacaagatcggcgcgctcaagcgcgtgctgtccagccatccgggcaccgcgaacgtgcac
atccgccacgtcggttcgcgcgagcgcaccacggtattgaaggtggccgacaatctgcgg
gtgtcgccgtcctcggcgctcatgggcgatttgaaggcgctactcggccccggctgcatg
gcgggctag
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