KEGG   Nocardia huaxiensis: H0264_18455
Entry
H0264_18455       CDS       T07784                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
nhu  Nocardia huaxiensis
Brite
KEGG Orthology (KO) [BR:nhu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nhu02048]
    H0264_18455
Prokaryotic defense system [BR:nhu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    H0264_18455
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QLY33943
UniProt: A0A7D6ZS26
LinkDB
Position
4113222..4115093
AA seq 623 aa
MLLERLVSYAREHRGTVPAFHRDREFRWKLDVSATARGIDSVPTLVPLKDPDKPRRGIVH
TTPSSTRTVGVSPNLAADDAQYVFGWIDDNTDQARAQQCHEAFVQLIHEWAESVPTEIDP
VPHTLSALFRSGLLASLEQPEELRAKDGVLITVNGVPAYRSVSAADYWRTHVGTKKGTGR
TGACMICQQVRPLANTIPGKVPAPLVPGASNDAALVSINERVFGYDLEAQLTHTPICMGC
ADDLMVGLTTVLSSSSSLTLSGQDTRLAWWVSGSDESDWMDLLLEPDPDQVNQLFLDVHR
GRERTSRLTGRFCWMAVGGNISRIMVRQWVDIALTCADDSAVSHDENVLAWFRDHKNTPR
RTAPIRRSDGTEIPAGQWIHSPGRFAACLGRWDGATKQYRPFGAKNADRPEQALLQLLRV
AVLNEPVPVAIQTHLIHRIRNDGRVDDCRASLIRLALTRSPARPKDTSIPMALDETCTDP
AYLAGRLFAVLEQTQRAAHRAPRARSADSGSLNSGDDGQPENSNRSPVNSTYGDRYFRRA
IETPQPVVLQGIKQSQAWLTKIRRRDGEARSQWYSNRIRAIVDPMTPSAWIPLRNNLWQQ
GQFVLGYNHQLAHRTMGENAETV
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgctgctggagcgcttggtgtcctacgcgcgggagcatcgtggaaccgtgccagcgttt
catcgtgaccgcgagttccgttggaagttggatgtttccgcgacggctcggggtatcgac
tcggtaccgacattggtgccgctgaaggatccggacaaaccgcgcaggggaatcgttcac
acgactccttcatcgacccgcaccgtcggggtctcgccgaacttagctgccgacgacgcc
cagtacgtttttgggtggatcgacgacaacaccgaccaggcccgagcgcaacagtgccac
gaggcattcgtgcagttgatccacgaatgggccgaatcggtgccgaccgagatcgatccg
gttccccacacgttgtccgcgctgttccgatcggggctgttggcgagtctcgaacaaccg
gaagagttacgagccaaggacggcgtgctcatcaccgtgaacggggtccccgcctaccgc
agtgtctccgcagccgactactggcgcacccatgtcggtacgaagaaggggaccggacgt
accggtgcctgcatgatctgtcaacaggtccggccgttggccaataccattcccggaaag
gtacctgcccctctggtgccgggcgctagcaatgacgcggcactggtcagtatcaacgag
cgcgtgttcggctacgacctggaagcccagctcacccatacaccgatctgtatgggctgc
gccgatgacttgatggtcgggctgaccacggtgctgtcctcgagtagcagcctcacactc
tccggacaggacacccggctggcatggtgggtctccggcagcgacgaatccgattggatg
gatctgctgctcgaacccgaccctgaccaggtcaatcagctgttcctcgacgtgcaccga
ggcagggagcgcaccagccggctgaccggtcgattctgttggatggcggtgggcggcaac
atctcccggatcatggtcaggcaatgggttgatatcgctctcacctgtgccgatgacagc
gctgtcagtcacgacgagaacgtgctggcctggtttcgcgaccacaagaacactccgcgg
cgcaccgcgcctatccggcgctcggatggcacggagatccctgcgggacagtggattcac
agccccggacggtttgccgcctgtttggggcgatgggatggggccaccaagcagtatcgc
ccctttggtgccaagaacgccgaccgcccggaacaggctctgctgcaactgcttcgggtc
gcagtcctcaacgaaccggtacccgtcgcgattcaaacccatctgatccaccgcatccgc
aacgacggccgggtcgatgactgtcgcgcctctctgatccgtctcgccctcacccgtagc
cccgcccgaccgaaggacacctccataccgatggccctcgatgaaacctgcaccgacccc
gcctatctcgccggacgcctctttgctgtccttgaacaaactcagcgcgccgctcaccgt
gcgcctagagcaaggtccgccgactccggctctttgaactctggggacgatggtcagccg
gagaactcgaaccgttccccggtaaacagcacctacggggaccgctatttccgccgcgcg
atcgagacgccgcaacctgttgtgctgcaagggatcaagcagtcacaagcctggctgacc
aagatccgccgccgagacggggaggcgcgttcccagtggtactccaaccgaattcgcgcg
atcgtggatccgatgacaccgtcggcgtggattcccctgcggaacaacctgtggcagcag
ggccagttcgtcctcggctataaccaccaactcgcccaccggaccatgggcgagaacgcc
gaaacggtttaa

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