Nocardia huaxiensis: H0264_20260
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Entry
H0264_20260 CDS
T07784
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H0264_20260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhu03400
]
H0264_20260
Enzymes [BR:
nhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H0264_20260
DNA repair and recombination proteins [BR:
nhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H0264_20260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
PDDEXK_1
DUF7127
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
QLY34534
UniProt:
A0A7D6VFV4
LinkDB
All DBs
Position
4487506..4491015
Genome browser
AA seq
1169 aa
AA seq
DB search
MTRESVSGTLFPDDVSGASLAHDPVDVEAGLWVTPEDSVSIAAGSGNAPGAQHVSDAAEV
AAGAAENRFELTGPLPTGTTVLEASAGTGKTYAIVGLAVRFVAEAGVDVSQLLLVTFSRA
ATQELRERTRDRFVSVAVALGDPERARAHTDELVRHLAQANPAEVAARRERLLAALSDFD
AGTIATTHSFCQRMLDELGLAGEQEPGVRLVEGIEDVVSTVADDLYLSRYARTTAPFAPA
EAQRLASAAVGDRQAVLVPEAEGEDDPAAERVAFAAAARVETQRRKRLSGLRDFDDLLVL
LHEVLADPEHGQRACQRIRDRFRVALVDEFQDTDPLQWDILRRAFHGHATLVLVGDPKQA
IYAFRGAEVLSYLDAVAHAGSRRELTTNRRSDAGLLAALEHLQGGAALGHKEITVHRVAP
TRSFTRLSGPAEQIVPLRLRCFPRTGAGALNRSGYPTVGRQRERIAVDVVADIVRLLESG
TRIDAGTEHERPIGPGDIAVLVRNHKQLDLVRRELERAGVAAVLTSGASVFSTPAAGEWL
WVLHALEQPHRADRVRLAAGTTLLGLSADEIDSGGADLVGRLSAELRDAGRLFARAGFAA
VFEKMSAATRLAPRLLALEGGERRLTDLRQIAQLLDEAALREGLGLTALTRWLADHVRDP
AAGSVANRSRRLDRDAAAVQLATVHASKGLEFPVVYLPFAWDAAKLRNPPTLLFHDEQGR
RVLDVGGPEAIGYNNRKVRAEAEEAAEELRLLYVALTRAGAQVVAWWAPAFDTQTSPLHR
MLLGREPGSPAVADKAPVPSDPVVLERFTEWAATAEPGVIAIEPVRAATPARLRRDATST
ATADLRAAHFDRTLDQDWRRTSYSALTAGAHDAPPSGDQPDGRGIADEPAAPAEIVAEAD
AFAGAAPSLMNELPYGAEFGTLVHEVLEYVDTDAADLASEIRARCEHAVAEQMFDADPDI
LAGSLLAVMHTPIGIGCLADIPTRDRLSELDFELPLAGGDTPTATRVTVPQIAVLLRRHL
PADDILAPYADQLAHLDDTPLRGFLTGSIDAVLRTAGPRFVVVDYKTNRLGTGDLTVAHY
TRDHMAAEMMRSHYPLQAILYSVALHRYLRWRLPGYDPAVHLGGIKYLFVRGMVGPETPD
GCGVFDWHPPAALVEDLSALLAGDTEVIR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgagtcggtctcgggcacattgttcccggatgacgtatccggggcgtcgctc
gcccacgacccggtggatgtggaagcaggtctgtgggtgacgcccgaggattcggtgagt
attgccgcaggttccgggaatgcgcccggcgcacagcatgtttccgatgcggccgaggtg
gccgcgggagcggccgagaaccggttcgagttgaccgggccgttgccgaccgggacgacg
gtgctggaagccagtgcggggaccgggaagacgtatgccattgtcgggctggcggtgcgg
ttcgtggccgaggcgggggtggacgtctcgcagttgctgctggtgaccttcagccgggca
gccacgcaggagttgcgcgagcgcacccgggatcggttcgtgagtgtggctgtggcgctg
ggggatccggagcgggcgcgggcgcacacagatgagctggtgcggcatctggcgcaggcc
aatccggcggaggtggcggcgcgacgggagcggctgctggcggcgctgtcggatttcgac
gctggaacgatcgcgaccacccacagtttctgtcagcggatgctggatgagctgggcttg
gcgggggagcaggagccgggggtccggctcgtggaggggatcgaggatgtcgtgtccacg
gtcgccgatgatctgtatttgagccggtatgcccgtacgacagcgcctttcgcgcccgcg
gaggcgcaacgactggcgtcggcggcggtgggggatcggcaggccgtgctggtgccggag
gccgagggcgaggacgatccggcggcggagcgggtggccttcgcggcggccgcgcgggtg
gaaacgcaacggcggaaacggctttcggggctgcgggacttcgatgatctgctggtgctg
ctgcacgaggtgctcgccgatccggagcacgggcagcgggcgtgccagcgcatccgggat
cggttccgggtggcgctggtggacgagttccaggacaccgatccgctgcagtgggacatt
ctgcggcgggccttccacgggcacgccaccctggtgctggtgggcgaccccaagcaggcg
atctacgccttccggggcgcggaggtgctgagctatctggacgcggtcgcgcacgccggc
agtcgtcgtgagctcaccaccaatcggcgcagtgatgccggattgctggcggcgctcgag
cacctgcagggtggtgcggcgctggggcacaaggagatcaccgtgcaccgggtggccccc
acgcggtctttcacccggctttccggtccggccgagcagattgtcccgttgcggctcagg
tgttttccgcgcacgggagccggggcgctgaatcgctccggctatccgacggtggggcgg
cagcgggagcggatcgcggtggatgtggtcgccgatatcgtgcggctgctggaatccggg
acgcgcatcgacgccgggaccgagcacgaaaggccgatcgggccgggcgatatcgcggtg
ctggtgcgcaaccacaagcagctcgacctggtgcgccgggaactggagcgggccggggtg
gcggccgtactcaccagcggggccagcgttttcagcaccccggccgccggagaatggctg
tgggtgctgcacgccctggaacagccgcaccgcgccgaccgggtgcggctggcggccggg
acgaccctgctcgggctgtccgccgacgagatcgattccggcggagccgatctggtggga
cggctcagtgccgaactgcgtgatgccggacggctgttcgcccgtgcgggtttcgcggcc
gtgttcgagaagatgagcgccgcaacccgattggcgccccggctgctggccctcgaaggc
ggtgaacgccggctcaccgacctgcggcagatcgcgcagctgctcgacgaggccgcgctg
cgcgagggcctcggcctgaccgcgctcacccgctggctggccgaccacgtgcgcgacccc
gccgcgggcagtgtcgccaatcgcagccgccgcctggaccgggatgccgcggccgtgcag
ctggccaccgtgcatgccagcaagggtctcgaattcccggtcgtctatctgcctttcgcc
tgggacgccgccaaactgcgcaacccgccgacgctgctgttccacgacgagcagggccgc
cgcgtgctggatgtgggcgggccggaggccatcggctacaacaaccgcaaggtgcgggcc
gaggccgaggaggcagccgaggagctgcgcctgctgtatgtcgcgctgacccgcgccggt
gcgcaggtggtggcctggtgggcgcccgccttcgacacccagacctctccgctgcatcgc
atgctgctggggcgcgagccgggcagccccgcggtggcagacaaggcgccggtgccctcg
gatcccgttgtgctggagcgtttcacggagtgggcggctaccgccgaaccgggcgtgatc
gccatcgaaccggtgcgcgccgccacccccgcccgcctgcgccgcgacgccaccagcacc
gccaccgccgacctgcgcgccgcccacttcgaccgcaccctggaccaggattggcggcgc
acctcctactcggcgctcaccgccggcgcacacgacgccccaccctccggtgatcagccc
gacggccgcgggatcgccgacgaaccggccgcacccgccgaaatcgtcgccgaggcggac
gctttcgcgggggccgcaccgtcgctgatgaacgagctgccctacggcgcggaattcggc
accctggtgcacgaggtcctcgaatacgtcgacaccgatgccgccgacctggcgagcgaa
atccgcgcccgctgcgagcacgccgtggccgagcagatgttcgacgccgaccccgacatc
ctcgcgggctccctgctggccgtcatgcacactccgatcggaatcggttgcctggcggac
attcccacccgcgaccggctcagcgaactcgacttcgaactccccctcgcgggcggtgac
acccccaccgccacccgcgtgacggtcccgcagatcgccgtcctgctgcgccgccacctg
cccgccgacgacatcctcgccccctacgccgatcagctcgcgcacctcgacgacaccccg
ctgcgcggcttcctcaccggcagtatcgacgccgtactccgcacggcgggaccgcgtttc
gtcgtcgtcgactacaagaccaaccgtctcggcaccggcgacctgaccgtcgcccactac
acgcgcgaccacatggccgccgagatgatgcgctcccactatccgctgcaggccatcctg
tattccgttgccctgcaccgttacctgcgctggcgtctgcccggctacgacccggccgtc
cacctcggcggcatcaagtacctgttcgtccgcggcatggtcggccccgaaacccccgac
ggctgcggcgtattcgactggcacccgcccgccgcgctggtggaggatctctcggccctg
ctcgccggagatacggaggtgatccgatga
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