Nocardia huaxiensis: H0264_26875
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Entry
H0264_26875 CDS
T07784
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H0264_26875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhu03400
]
H0264_26875
DNA repair and recombination proteins [BR:
nhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H0264_26875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6444
Motif
Other DBs
NCBI-ProteinID:
QLY28929
UniProt:
A0A7D6ZUE7
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All DBs
Position
5942686..5943606
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AA seq
306 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYTATEDHDIKFHQVHAADGGRIRYERVCTVDGQPVQYSDI
DRAYESPEGDRVILTDEDFSKLPAAEKHEIPVLQFVPADQIDPILYDKSYYLEPDSNTPK
AYVLLAKTLEEVDRVALVHFTLRQKTRLGALRVRDGVLVLQTMLWPDEVRSVAFDKLDDV
SEPKAQELKMAETLVETLSDDFDPSLYVDEYQIELKKLLDEAIASGSSKVKRAPETAAPE
MDAEVVDLVAALQRSLEASGRKVGKTTPKAAAKPAADKPAKAAAKKTAAKKTAKKAPAKQ
ATRKGA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatctggaagggctccatcgcgttcggactggtgaacgtccccgtgaaggtg
tacaccgccacggaggaccacgacatcaagttccaccaggtgcatgccgccgacggcggc
cggatccgctatgagcgggtgtgcacggtcgacggccagccggtgcagtattccgacatc
gacagggcctacgaatcccccgagggcgatcgggtgattctcaccgacgaggacttctcg
aaactccccgcggccgagaaacacgagatcccggtcctgcaattcgtgcccgccgatcag
atcgacccgattctctacgacaagagctactacctggaaccggattcgaacaccccgaaa
gcgtatgtgctgctcgccaaaaccctcgaagaggtggatcgggtggcactcgtgcatttc
acgctgcggcagaagacccggctgggtgcgctgcgggtgcgcgacggcgtgctggtgctg
cagaccatgctgtggcccgatgaagtccggtcggtggccttcgacaaactcgacgacgtc
tccgagcccaaggcccaggaattgaagatggccgagaccctggtcgaaacgctgtccgat
gatttcgatccgagcctctacgtggacgaatatcagatcgaattgaagaaactgctcgac
gaggccattgccagcggcagcagcaaggtgaaacgcgccccggaaaccgccgccccggaa
atggatgccgaggtcgtggacctggtcgccgccctgcagcgcagcctggaagcctccggc
cgcaaggtcggcaagaccaccccgaaagccgccgcgaaaccggccgcggacaaacccgcc
aaggccgcggccaagaaaaccgccgccaagaagaccgcgaagaaggccccggccaaacaa
gccacccgcaagggcgcgtga
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