Novosphingobium humi: PQ457_00720
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Entry
PQ457_00720 CDS
T08806
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nhum
Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhum03032
]
PQ457_00720 (gyrB)
03400 DNA repair and recombination proteins [BR:
nhum03400
]
PQ457_00720 (gyrB)
Enzymes [BR:
nhum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PQ457_00720 (gyrB)
DNA replication proteins [BR:
nhum03032
]
Prokaryotic type
DNA Topoisomerases
PQ457_00720 (gyrB)
DNA repair and recombination proteins [BR:
nhum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PQ457_00720 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WCT77550
UniProt:
A0ABY7TXD8
LinkDB
All DBs
Position
complement(166473..169016)
Genome browser
AA seq
847 aa
AA seq
DB search
MSSENSSANQPNTNAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAID
EALAGHCDLVLIELNPDGSVSVEDNGRGIPTGLHPEEGVSAAEVIMTQLHAGGKFENTSD
DNAYKVSGGLHGVGVSVVNALSEWLELTIWREGQEHWMRFRHGDAENPLIVKGDAPIYES
GTRKGQKKNGTRVTFLASDETFKNVTVYDFDKLEHRYRELAFLNSGVRILLRDLRGEEVK
EHDLYYEGGIAAFVRYLDRNKMALIPEPIAITADKDGIGIDVALQWNDSYYENVLCFTNN
IPQRDGGTHLAAFRAALTRTLNNYAERSGMLKKEKVSLSGEDMREGLTAIVSVKLPDPKF
SSQTKDKLVSSEVRQPLEALMADKMTQWLEENPAHAKSIIQKVIDAAAAREAAKRARELT
RRKGVMDIASLPGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRHYQAILPLKGKILN
VERARFDRIISSKEVGTLIQAMGTGIRDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTF
FHRQMPDIIRAGHLFIAQPPLYKVAKGRSEVYLKDNAALDRYLVEAGLSGRMLETATGAR
SGRDLEDLVDHAMRFRNLMAFVQRKYNPAVIEAMALAGSLEHGLNPQDRKAALDKAAAWL
GRSDREARWEAILTEDGHVEFLRHWRGVTDYHKIEAAFLISAEARKLARLAAEQAEVYAS
PAKFSRSTAVAAEPEPVVEEAEGEDAPAATRPVDLDGSITRPSQLLEAVLATGRKGLSIQ
RYKGLGEMNAEQLWETTLDPNNRALLQVKVEDADVTDEIFTRLMGDIVEPRREFIQENAL
NVANLDV
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaaaattcctcggccaatcagcccaacaccaacgcctatggcgcagactcg
atcaaggtcctgaagggactggacgcggtgcgcaagcggcccggcatgtatatcggcgac
accgacgatggatcgggcctgcaccacatggtgttcgaggtctcggacaatgccatcgac
gaggcgctggccggtcattgcgatctggtgctgatcgagctgaacccggacggttcggtt
tcggtcgaggacaatgggcgcggcatccccaccgggctccaccccgaggaaggcgtttcg
gcggcagaggtcatcatgacccagctccacgcgggcggcaagttcgagaacaccagcgac
gacaatgcctataaggtgtcgggcggtctgcatggcgtgggcgtctcggtggtcaacgcg
ctttcggaatggctcgaactgaccatctggcgcgaggggcaggagcattggatgcgcttc
cgccatggcgacgcggaaaatccgctgatcgtcaaaggtgatgcgccgatctatgaaagc
ggcacccgcaaaggccagaagaagaacggcacccgcgtgaccttcctggccagcgacgag
acgttcaagaatgtcactgtctatgactttgacaagctggagcatcgctaccgcgaactg
gcatttttgaacagcggcgtgcgcatcctgctgcgcgacctgcgcggagaggaagtcaag
gaacacgacctctattacgaaggcggcatcgcggcctttgtgcgttatctcgaccgcaac
aagatggcgctgatccccgaacccatcgccatcacggcggacaaggacgggatcggcatc
gatgtggcgttgcagtggaacgattcctattacgaaaacgtcctgtgcttcaccaacaac
atcccccagcgcgatggcggcacgcatttggccgccttccgcgccgcgttgacgcgcacg
ctcaacaattatgccgaacgttcgggcatgttgaagaaggaaaaggtgtcgctttccggt
gaggatatgcgcgagggcctgaccgccatcgtttcggtcaagctgcccgatcccaagttc
tcctcgcagaccaaggacaagctcgtctcctccgaagtgcgtcagcctttggaagcgctg
atggccgacaagatgacgcagtggctggaggaaaacccggcccatgcgaaatccatcatc
cagaaggtgattgatgccgccgccgcgcgtgaggccgccaagcgcgcccgcgaactgacc
cgccgcaagggggtgatggatatcgcgagcctgccgggcaagctggccgattgtcaggag
cgcgatccgtcgaagtgcgaacttttcctcgtcgagggtgactcggcaggcggatcggcc
aagcagggccgcgaccgccattatcaggcgattctacctttgaagggcaagatcctgaac
gtggaacgcgcgcgtttcgaccggatcatctcgtccaaggaagtcggcacgctgatccag
gcgatgggcaccggcatccgcgatgaattcaatcttgaaaagctgcgctatcacaagatc
gtcatcatgaccgacgccgacgtcgacggcgcgcatatccgcaccctgctgctgaccttc
ttccaccgccagatgcccgacatcatccgcgcgggccacctcttcatcgcccagccgcct
ttgtacaaggtcgcaaaggggcgcagcgaagtttacctcaaggacaatgccgcgctcgac
cgctatctggtcgaagcaggcctgtcgggccggatgctggaaaccgccacgggcgcgcgt
tcgggccgcgatctggaagatctggtcgatcacgccatgcgcttccgcaacctgatggcc
tttgttcaacgcaaatataaccccgccgtcatcgaagcgatggcgctggccggttcgctc
gaacatggcctgaacccgcaggaccgcaaggccgcgctggacaaggccgccgcatggctg
ggccgctcggaccgtgaggcgcggtgggaagcgatcctgaccgaagatggccatgtcgaa
ttcctgcgccactggcgcggcgtgaccgattatcacaagatcgaggccgctttcctgatc
agcgccgaagcgcgcaaactggctcgtctggccgccgaacaggccgaggtctatgcctcc
ccggccaagttcagccgttcgaccgccgttgccgccgagcccgaaccggtggtcgaggaa
gccgagggcgaggacgcccccgccgccacccgccctgtcgatctcgacggttcgatcact
cgcccctcgcaattgctcgaagcagtgctcgccaccgggcgcaagggcctctctatccag
cgctacaaaggccttggcgagatgaacgcggaacagctctgggaaaccacgctcgatccg
aacaaccgcgccctgttgcaggttaaggtcgaagacgccgacgtgacggacgaaatcttc
acccgcctgatgggcgatatcgtcgaaccgcgccgcgaattcattcaggaaaacgcgctc
aacgtggcgaacctcgatgtctga
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