Novosphingobium humi: PQ457_02440
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Entry
PQ457_02440 CDS
T08806
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00300
Lysine biosynthesis
nhum01100
Metabolic pathways
nhum01120
Microbial metabolism in diverse environments
nhum01230
Biosynthesis of amino acids
Module
nhum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQ457_02440 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nhum01002
]
PQ457_02440 (dapE)
Enzymes [BR:
nhum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PQ457_02440 (dapE)
Peptidases and inhibitors [BR:
nhum01002
]
Metallo peptidases
Family M20
PQ457_02440 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WCT78927
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All DBs
Position
519783..520937
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AA seq
384 aa
AA seq
DB search
MVKSELVRPGAGVAELAEALIACPSVTPATGLVFDCLEEMLAPLGFAIHRAVVGEAPDGP
VENLFAIRQGPQGSRHFAYAGHVDVVPPGEGWSSAPFAPERRGELLYGRGAVDMKGSIAA
FVAALRDIPAEAGTISLIITGDEEGAATFGTVKIIDHMREAGINPDLILVGEPTSVHRLG
DMIKVGRRGSVNMWIEVEGQQGHVAYPHLADNPITRLVAMLSELKAIKLDEGTDWFQPSN
LEVTDISCGNPATNVIPHKAAARISIRFNDLHTGESLSKLVREIGAKHGASVRPVISGEA
FLTPPGEFSAIVVDAIRAETGLDTEISTSGGTSDARFLKALAPVIEFGLCNATMHKKDEA
VAIPDLETLSRIYARIVLAGLKRA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagcgagttggtccggcccggcgccggtgtggccgaattggccgaggccctg
attgcctgccccagcgtgacgccggccacggggctggtgttcgattgcctcgaggaaatg
ctggcgccgctgggctttgccatccaccgcgccgtggtgggcgaggcgcccgacgggccg
gtggaaaacctcttcgccatccgccaggggccgcagggcagccgccatttcgcctatgcg
ggccatgtcgatgtcgtcccgccgggcgaggggtggagcagcgcgccctttgcgcccgaa
cgccggggcgaattgctctatggccgcggcgcggtggacatgaagggctcgattgccgcc
tttgtcgccgccctgcgcgacattccggccgaggcgggcacgatcagcctgatcatcacc
ggcgatgaagaaggcgcggcgaccttcggcacggtcaagatcatcgaccatatgcgcgag
gccgggatcaatcccgacctgatccttgtgggcgaacccaccagcgtccatcgccttggc
gacatgatcaaggtgggccgccggggcagcgtcaatatgtggatcgaggttgagggccaa
cagggccatgtcgcctatccgcatctggccgataatccgatcacgcggttggtggcgatg
ctctcggagctgaaggctattaagctggacgaggggaccgactggttccagcccagcaat
ctggaagtgaccgacatttcctgcggcaatccggccaccaatgtcatcccgcacaaggct
gccgcgcgcatttccatccgtttcaacgatctgcacacgggcgagagcctgtcaaagctg
gtgcgcgagatcggggccaagcatggggcaagcgtgcgtccggtgatctcgggcgaggct
ttcctgaccccgccgggcgagttttcggccatcgtggtcgatgcgatccgcgccgaaacc
gggctggacaccgaaatttcgaccagcggcggcacgtcggatgcgcgcttcctcaaagcc
ttggccccggtcatcgaatttggcctgtgcaacgccacgatgcacaagaaggatgaggcg
gtcgcgattcccgatctggaaacgctctcgcggatctatgcccgcatcgtgctggccggc
ctcaaacgcgcctga
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