Novosphingobium humi: PQ457_04150
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Entry
PQ457_04150 CDS
T08806
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00300
Lysine biosynthesis
nhum00470
D-Amino acid metabolism
nhum01100
Metabolic pathways
nhum01110
Biosynthesis of secondary metabolites
nhum01120
Microbial metabolism in diverse environments
nhum01230
Biosynthesis of amino acids
Module
nhum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQ457_04150
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQ457_04150
Enzymes [BR:
nhum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PQ457_04150
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WCT78174
UniProt:
A0ABY7U1Y5
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All DBs
Position
919131..920360
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AA seq
409 aa
AA seq
DB search
MKPLGPIPAGFAGRDGVLTIDGAKVTELIAQSGGATPLFVYSGAMLRARVADLRAAMPDR
LAIHYAMKANPFAPLLRLMGTLVDGFDIASGGELGMALEAGLDPERISFAGPGKRDMELQ
AAIMRGVTLNLESEGEAERALKIAERIGKTPRLAIRVNPDFGLAGSGMKMGGGAKPFGVD
AERVPELARRIIAAGAQWRGFHIFAGSQSLYTDAIIETQAQTLKLAARLAEEAGVGLPHC
NLGGGMGIPYFPGDTPVDAKRVGEALAREFEQMPDVLAETQFCIELGRYLVGEAGVYLTR
IVDRKISHGEVYLVTDGGLHHQLAASGNFGTVVRRNYPVAIATKFGAESVEEASVVGCLC
TPLDRLADKAGFPHADVGDLVAVFCAGAYGASASPSAFLGQGPAREMMV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctttggggccgattccggcgggttttgccgggcgtgacggggttttgacgatt
gacggggccaaggtcaccgaactgatcgcgcagagcgggggggcaacgccgctgtttgtc
tattcgggcgccatgctgcgcgcgcgggtggcggatctgcgtgcggcgatgccggaccgg
ctggccatccattatgcgatgaaggccaatccctttgcgcccctgctgcggctgatgggc
acgctggtcgatgggttcgacattgccagcggcggcgagttgggcatggcgctcgaggcg
gggctggaccctgaacggatcagctttgccgggccgggcaagcgcgacatggaattgcag
gctgcaatcatgcgcggggtcacgctcaatctggaatccgaaggcgaggcggagcgcgcg
ctgaagatcgccgagcgaatcggcaagactccaaggctggcgatacgggtaaaccccgat
ttcggccttgcgggatcgggcatgaagatgggcggcggggccaagccctttggcgtcgat
gccgagcgcgtgcccgaactggcgcggcgaatcattgcggcaggggcgcagtggcgggga
tttcatatcttcgccgggtcgcaatcgctctataccgatgcgatcatcgagacacaggcc
cagaccctcaaactggccgcccggctggccgaggaggcgggcgtgggcctgccgcattgc
aatctgggcgggggcatgggcattccctatttccccggcgacacgcctgtcgatgcgaag
cgtgtgggcgaggcattggcgcgcgaatttgaacagatgcctgacgttctggccgaaact
cagttctgcatcgaactgggccgttatctggtgggtgaggctggggtttacttgacccgt
attgtcgatcgcaagatcagtcatggcgaagtctatctggtgacggatggcggattgcac
caccaactggcggccagcggcaatttcggcacggtcgtgcggcgcaactatcccgttgcc
atcgccacgaaattcggcgccgaatcggttgaggaagccagcgtcgtgggctgtctttgc
accccgcttgaccggctggccgacaaggcgggctttcctcatgccgatgtgggcgatctg
gtcgcggtgttctgcgcgggcgcctatggggccagcgccagcccttcggccttcctcgga
cagggcccggcgcgcgagatgatggtgtag
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