Novosphingobium humi: PQ457_04525
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Entry
PQ457_04525 CDS
T08806
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
nhum
Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nhum03000
]
PQ457_04525 (pspF)
Transcription factors [BR:
nhum03000
]
Prokaryotic type
Other transcription factors
Others
PQ457_04525 (pspF)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_16
AAA
HTH_28
AAA_2
HTH_50
MCM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCT78245
LinkDB
All DBs
Position
1000119..1001144
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AA seq
341 aa
AA seq
DB search
MALSPHHAPRDTQFIGQSGAFLDAVERASRAAPLRRPVLVIGERGTGKELIAERLHRLSS
RWDEPLVTLNCAAMPETLIEAELFGHEAGAFTGATRARAGRFEEADRGTLFLDELGTLSM
GAQERLLRAVEYGEVTRIGASRPLRVDVRIVAATNEDLPRMAREGRFRADLLDRLSFEVI
TLPPLRAREGDIAVLAEYFGRRMASEMGWDRWPGFSGAAAAALEKYHWPGNVRELRNVIE
RAVYRSDSPEMPIAEITFDPFDSPWKPTQSLRAADHEAAPAPVMAGDLAGVSDLRGAVDA
HEKAIVEAALARHRYNQRQTAKALGLTYDQLRHTMRKHHLL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatctccccaccatgctccgcgcgacacgcaattcatcggccagtcgggcgcc
ttcctcgatgccgtcgagcgcgccagtcgcgctgcgcccctgcgccgcccggtgctggtg
atcggcgagcgggggacgggcaaggagttgattgccgaacgcctccaccgcctgtcctcg
cgctgggacgagccattggtgacgctcaattgcgcggccatgcctgaaacgctgatcgag
gcggaattgttcgggcatgaggcgggggcctttaccggcgcgacacgggcgcgggcgggg
cggttcgaagaggcggatcgcggcacactgttcctcgatgaactgggcacgctctccatg
ggcgcgcaggagcgcctgctgcgcgcggtggaatatggcgaggtgacgcggatcggggcc
tctcgcccgctgcgggtggatgtgcgcatcgtggcggccaccaatgaggatctgccccgc
atggcgcgcgaggggcggtttcgcgccgacctactcgaccgtttgagtttcgaggtcatc
accctgccgccccttcgcgcgcgcgaaggggatattgcggtgctggccgaatatttcggg
cggcgcatggccagcgagatgggctgggaccgctggccggggttcagcggggcggcggcg
gcggcgctggagaaatatcactggccgggcaatgtgcgtgagctgcgcaatgtgatcgag
cgggcggtctatcgcagcgacagcccggaaatgccgattgccgaaatcacctttgatcct
ttcgattcgccatggaagccgacccaatcgctgcgcgccgccgatcatgaggccgcgccc
gcgcccgttatggcgggcgatctggccggtgtgtcggatctgcgcggggcggtggatgcg
catgaaaaggccatcgtcgaggccgcccttgcccgccaccgatacaaccagcgtcagacc
gccaaggcgctgggcctgacctatgaccagttgcgccatacaatgcgcaagcatcatctg
ctttga
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