Novosphingobium humi: PQ457_04580
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Entry
PQ457_04580 CDS
T08806
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nhum
Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nhum03016
]
PQ457_04580 (truB)
Enzymes [BR:
nhum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PQ457_04580 (truB)
Transfer RNA biogenesis [BR:
nhum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PQ457_04580 (truB)
Prokaryotic type
PQ457_04580 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
WCT78255
LinkDB
All DBs
Position
1010662..1011579
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AA seq
305 aa
AA seq
DB search
MSVHGWIILDKPLELGSTQAVRAVKRNLRQAGYNMKLKGGIKVGHGGTLDPLASGILPIA
LGEATKLTGRMLDASKTYDFTVKFGEETETLDLEGKVVAVSDLRPIAAEIAAVLPSFTGP
IEQVPPAYSALMIDGVRAYDRARRGEAVDMPTRAVTIHALDLIDAGEDWATLRAHVSKGT
YIRSLARDIALALGTRGSVTMLRRLSAGPFTLDHAISLDSLNEIGQGAPLETKLLPLEAG
LVDIPALSLTPQQAGAVRQGRVLLGQPYPDGLYLARLGNVPVALMMLEGGSAKVERGFNL
SDVAE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccacggctggatcattctcgacaagcctctggagcttggcagcacgcaggcc
gtcagagcggtcaagcgcaacctgcggcaggcgggttataacatgaagctgaaaggcggg
atcaaggtgggccatggcggcacgctggacccgctggccagcgggattttgccgattgcg
ctgggcgaggccacgaaattgacggggcggatgctggatgcgtccaagacctatgatttc
acggtgaagttcggcgaggagacggaaacgctcgatcttgagggcaaggtggtggcggta
agcgatttgcggcccattgcggcggaaatcgccgcagtgttgcccagctttaccgggcct
atcgagcaggtgccgcccgcctattcggcgctgatgatcgatggggtgcgcgcctatgac
cgcgcgcgccggggcgaggcggtggatatgcccacacgtgccgtcacgatccatgcgctc
gatctgatcgatgcgggcgaggattgggccactctgcgcgcccatgtgtcgaagggcacc
tatatccgaagtctggcgcgcgacattgccttggcgctggggacacgaggttcggtaacg
atgttgcggcggctgtcggcggggccgtttacgctggatcacgcgatttcgctggactcc
ttgaacgaaatcggtcagggggcgccgcttgaaactaaacttctgccgctagaggcaggg
ctggtcgacatcccggctctttccctcacgccccagcaggcaggggcggtccgtcagggc
cgcgttcttttggggcagccctatcccgacgggctttatctggcgcggcttggcaatgtg
cctgtcgcgctgatgatgcttgaagggggctcggccaaggtcgagcgggggttcaacctt
tcggatgtcgcggagtag
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