Novosphingobium humi: PQ457_05410
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Entry
PQ457_05410 CDS
T08806
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00220
Arginine biosynthesis
nhum00240
Pyrimidine metabolism
nhum00250
Alanine, aspartate and glutamate metabolism
nhum01100
Metabolic pathways
nhum01110
Biosynthesis of secondary metabolites
nhum01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PQ457_05410 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PQ457_05410 (carB)
00220 Arginine biosynthesis
PQ457_05410 (carB)
Enzymes [BR:
nhum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PQ457_05410 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WCT78409
UniProt:
A0ABY7TYP9
LinkDB
All DBs
Position
1209041..1212355
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AA seq
1104 aa
AA seq
DB search
MPKRTDISSILVIGAGPIIIGQACEFDYSGTQAIKALKEEGYRVILVNSNPATIMTDPEM
ADATYIEPITPAMVAKIIEKERPDAVLPTMGGQTALNTALALFEDGTLEKYGVQMIGADA
DAIDKAEDRQRFREAMDKIGLESARSGVAHTVEEAFAVLERTGLPSIIRPSFTLGGTGGG
IAYNKAEFEKIVKSGLEASPTTEVLIEESLLGWKEYEMEVVRDKNDNSIIICSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRTASLNVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELTNEITGATPASFEPSIDYVVTKIPR
FAFEKFKGSEPILSTAMKSVGEVMAIGRNIKESMQKALRGLETGLDGFNRVDELVGASRD
EITAALSRATPDRLLVVAQAFREGFSAADINRITHYDPWFLAHIEEIIAAEAEVAKNGLP
NDAEGLRRLKAMGFSDKRLAKLAVQSATLAGSANMARSGLLHDVVEAMVGATSEAEVRAL
RHRLGVRPVFKRIDSCAAEFEAITPYMYSTYEAPMFGAAENEAAPSDRKKIVILGGGPNR
IGQGIEFDYCCCHACFALDEVGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEILT
VEQSKGELVGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALVEQLDL
KQPANGIARSRDEAVAVANRIGYPVLMRPSYVLGGRAMEIVDSVAQLDDYIATAVQVSGD
SPVLIDQYLRDAIECDVDALCDGEKVVVAGVMQHIEEAGIHSGDSACTLPPYSLSAEIIA
EMERQAEALALALGVKGLMNIQFAVKDGEVYLIEVNPRASRTVPFVAKAIGQPVAKIAAR
VMAGEKLDTFPPFRRDLPYMAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGLDKDFATAF
AKSQLGAGVKLPQEGVVFISVKDTDKAVVLPAARKLVDLGFKLIATGGTQKFLAEAGVAV
ELVNKVAEGRPHIVDRIIDGGVALVFNTTEGWQSLKDSQSIRQAALGNKVPYFTTAAGSV
AAVEAIGALRSASLEVCPLQAYYS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcggacagacatctcctcgatcctcgtcattggcgcggggcccatcatcatc
ggtcaggcctgcgagtttgactattccggcacgcaggcgatcaaggcgctgaaggaagaa
ggttaccgggtcatcctggtcaactcgaacccggcgacgatcatgaccgacccggaaatg
gccgatgcgacctatatcgagccgatcaccccggccatggtcgccaagatcatcgaaaag
gagcgccccgatgcggtgcttcccacgatgggcggccagaccgctttgaacaccgcgctg
gcgctgtttgaagacggtacgctggaaaagtacggcgtccagatgatcggcgccgacgcc
gacgccatcgacaaggccgaagatcgccagcggttccgcgaggcgatggacaagatcggt
ctggaatcggcgcgcagcggcgtggcccatacggtagaggaagcctttgccgtgctggaa
cgcaccggccttccctcgatcatccgcccctcctttacgctgggcggcacgggcggcggc
attgcctataacaaggccgagttcgaaaagatcgtgaagagcggtctggaagccagcccc
accaccgaagtgctgatcgaagaatcgctcctcggttggaaggagtatgagatggaggtc
gttcgggacaagaacgacaattctatcatcatctgctcgatcgagaatatcgatccgatg
ggcgtccacacgggcgattcgatcacggtcgcgcccgcgctgacgctgacggacaaagaa
tatcagatcatgcgtaccgcgtccctgaacgtgctgcgcgagatcggcgtggaaacgggc
gggtcgaacgtgcagttcgcggtcaatcccaaggatggccgtctgatcgtgatcgaaatg
aacccgcgcgtgtcgcgttcgtcggctttggcgtccaaggccaccggcttccccatcgcg
cgcgtcgcggccaagctagctgtgggttatacgctggacgagctgaccaacgagatcacg
ggcgccacgcccgcctcgttcgagcccagcatcgactatgtcgtcaccaagatcccgcgc
tttgcctttgaaaagttcaagggctccgagccgatcctgtccaccgcgatgaagagcgtg
ggcgaggtgatggccatcgggcgcaacatcaaggaatcgatgcagaaggcgctgcgtggt
ctggaaacgggcctcgacggtttcaaccgcgtcgatgaactggtgggcgcaagccgtgat
gagatcaccgcggccctctcgcgcgccacgcccgaccgcctgctggtggtggcgcaggcc
ttccgtgaaggtttctccgccgccgacatcaaccggatcacccattacgatccgtggttc
ctggcccatatcgaggaaatcattgcggccgaggccgaggtggccaagaatggcctgccc
aatgatgccgagggtctgcgccgtctgaaggcgatgggcttctcggacaagcgtctggcc
aagctggcggtgcagtccgcaacgcttgcgggcagcgccaatatggcgcgttcgggcctg
ttgcatgatgtggtcgaagcgatggtgggcgccaccagcgaggccgaagtgcgcgctctg
cgccaccgtctgggcgtgcgcccggtgttcaagcgcatcgacagctgcgcggccgagttc
gaggcgatcacgccttatatgtactcgacctatgaagcgccgatgtttggcgcggccgag
aacgaggccgcgcccagcgaccgcaagaagatcgtgatccttggcggcggcccgaaccgt
atcggtcagggcatcgagttcgactattgctgctgccatgcctgtttcgcgctggacgag
gtgggctatgaaaccatcatggtcaactgcaacccggaaacggtttcgaccgactatgac
acttcggaccgcctctatttcgagccgctgacggccgaggacgtgctggaaatccttacg
gttgaacagtcgaagggcgaactggtcggcgtgatcgtgcagtttggcgggcagaccccg
ctcaaactggcgcaggcgctggaagacgcgggcatccccattctgggcaccagcccggat
gccatcgaccttgccgaagaccgcgagcgtttcgccgctctggttgagcagctcgacctc
aagcagccggccaatggcattgcgcgcagccgtgacgaagccgtggcggtggccaatcgc
atcggttatccggtgctgatgcgtcccagctacgtgctgggtggccgcgcgatggaaatc
gtcgacagcgtggcgcagcttgatgactatatcgccacggcggtgcaggtgtcgggcgac
tcgccggtgctgatcgaccagtatctgcgcgatgcgatcgaatgcgatgtcgatgcgctg
tgcgatggcgaaaaggtcgtcgtggcgggcgtgatgcagcatatcgaagaggccggcatc
cactcgggcgacagcgcctgcaccctgccgccttacagcctttcggccgagatcatcgcc
gagatggagcgtcaggccgaagcgctggcgctggcgctgggcgtcaaggggctgatgaac
atccagttcgcggtcaaggatggcgaggtttacctcatcgaggtcaatccccgcgcctcg
cgcacggtgcctttcgtggccaaggccatcggtcagccggtggccaagatcgccgcgcgc
gtgatggcgggcgaaaagctggacacgttcccgccgttccgccgcgatctgccctatatg
gcggtcaaggaagcggtgttcccgtttgcccgtttccccggcgttgaccctgtgctttcg
cccgaaatgaagtccaccggcgaggtcatgggcctcgacaaggactttgccacggccttt
gccaagagccagttgggcgcgggcgtcaagctgcctcaggaaggcgtggtgttcatttcg
gtcaaggacaccgacaaggcggtcgtgctgcccgccgcgcgcaagctggtcgatctgggc
ttcaagctgatcgccacgggcgggacgcaaaagttcctggccgaggcgggcgttgcggtc
gaactggtcaacaaggtggccgaagggcgcccgcatatcgtggaccggatcatcgatggc
ggcgtggctctggtgttcaacaccaccgagggttggcagagcctgaaggactcgcagagc
atccgtcaggcagcgctgggcaacaaggtgccttacttcaccacagcggcgggcagcgtc
gcggctgtggaagcgattggcgccttgcgttcggccagtcttgaagtgtgcccgttgcag
gcctattatagctga
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