Novosphingobium humi: PQ457_05985
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Entry
PQ457_05985 CDS
T08806
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00300
Lysine biosynthesis
nhum00470
D-Amino acid metabolism
nhum01100
Metabolic pathways
nhum01110
Biosynthesis of secondary metabolites
nhum01120
Microbial metabolism in diverse environments
nhum01230
Biosynthesis of amino acids
Module
nhum_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PQ457_05985 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PQ457_05985 (dapF)
Enzymes [BR:
nhum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PQ457_05985 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WCT78512
UniProt:
A0ABY7TZ15
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Position
complement(1320331..1321143)
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AA seq
270 aa
AA seq
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MRIGFVKMHGLGNDFVVLDGRSEALPEITTTLAAALANRHTGIGCDQLVVLDGSDVADFR
MRFFNADGSESGACGNASRAVGLLHGRPARIETQGGILTTEPSEAGISVDMGVPRFDWDA
IPLGFAMDTLTMPVGWEDLRDPTAVNVGNPHVIFFTPDTDAVDLARIGPIIEHDPLFPER
INVNVATIASRGAIRLRVWERGSGITLACGTGACATAVGAMRRGLVDRRVEVTLPGGRLI
IEWNADGRIIMTGPATEAFRGSFELSDFPA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataggttttgtcaagatgcacgggctgggcaatgatttcgtcgtccttgatggg
cgcagcgaagccctgcccgaaatcaccaccacgctggccgccgctctggccaaccgccac
accggcatcggctgcgatcaactggtcgtgctggacgggtcggatgtggccgatttccgc
atgcggtttttcaacgccgacggcagcgaaagcggcgcctgcggcaatgccagtcgcgcc
gtgggcctgctgcatggccgccccgctcgaatcgagacgcagggcggcatattgaccacc
gagccgagcgaggccgggatcagcgtcgatatgggcgtgccgcgctttgactgggatgcc
attccgctgggctttgcgatggacactctgaccatgccggtgggctgggaagacctgagg
gaccccacggcggtcaatgtcggcaacccgcatgtgatctttttcacgcccgacaccgat
gccgtcgatctggcccgcatcggtccgatcatcgagcatgatccgctgtttcccgagcgc
atcaacgtcaatgtcgccaccatcgcctcgcgcggcgccatccgcctgcgcgtgtgggag
cgcggctcgggcattacgctggcctgcggcacgggggcctgcgccacggcggtgggcgcg
atgcgccggggccttgtcgaccgccgggtcgaggtcacgctgcccggtggccgcctgatc
atcgagtggaacgccgatggccgcatcatcatgaccggccctgccactgaagcctttcgc
ggcagcttcgagctctccgatttccctgcatga
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