KEGG   Novosphingobium humi: PQ457_05985
Entry
PQ457_05985       CDS       T08806                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
nhum  Novosphingobium humi
Pathway
nhum00300  Lysine biosynthesis
nhum00470  D-Amino acid metabolism
nhum01100  Metabolic pathways
nhum01110  Biosynthesis of secondary metabolites
nhum01120  Microbial metabolism in diverse environments
nhum01230  Biosynthesis of amino acids
Module
nhum_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nhum00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PQ457_05985 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PQ457_05985 (dapF)
Enzymes [BR:nhum01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PQ457_05985 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: WCT78512
UniProt: A0ABY7TZ15
LinkDB
Position
complement(1320331..1321143)
AA seq 270 aa
MRIGFVKMHGLGNDFVVLDGRSEALPEITTTLAAALANRHTGIGCDQLVVLDGSDVADFR
MRFFNADGSESGACGNASRAVGLLHGRPARIETQGGILTTEPSEAGISVDMGVPRFDWDA
IPLGFAMDTLTMPVGWEDLRDPTAVNVGNPHVIFFTPDTDAVDLARIGPIIEHDPLFPER
INVNVATIASRGAIRLRVWERGSGITLACGTGACATAVGAMRRGLVDRRVEVTLPGGRLI
IEWNADGRIIMTGPATEAFRGSFELSDFPA
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcgcataggttttgtcaagatgcacgggctgggcaatgatttcgtcgtccttgatggg
cgcagcgaagccctgcccgaaatcaccaccacgctggccgccgctctggccaaccgccac
accggcatcggctgcgatcaactggtcgtgctggacgggtcggatgtggccgatttccgc
atgcggtttttcaacgccgacggcagcgaaagcggcgcctgcggcaatgccagtcgcgcc
gtgggcctgctgcatggccgccccgctcgaatcgagacgcagggcggcatattgaccacc
gagccgagcgaggccgggatcagcgtcgatatgggcgtgccgcgctttgactgggatgcc
attccgctgggctttgcgatggacactctgaccatgccggtgggctgggaagacctgagg
gaccccacggcggtcaatgtcggcaacccgcatgtgatctttttcacgcccgacaccgat
gccgtcgatctggcccgcatcggtccgatcatcgagcatgatccgctgtttcccgagcgc
atcaacgtcaatgtcgccaccatcgcctcgcgcggcgccatccgcctgcgcgtgtgggag
cgcggctcgggcattacgctggcctgcggcacgggggcctgcgccacggcggtgggcgcg
atgcgccggggccttgtcgaccgccgggtcgaggtcacgctgcccggtggccgcctgatc
atcgagtggaacgccgatggccgcatcatcatgaccggccctgccactgaagcctttcgc
ggcagcttcgagctctccgatttccctgcatga

DBGET integrated database retrieval system