Novosphingobium humi: PQ457_06275
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Entry
PQ457_06275 CDS
T08806
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
nhum
Novosphingobium humi
Pathway
nhum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ457_06275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nhum02000
]
PQ457_06275
Transporters [BR:
nhum02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PQ457_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
nSTAND3
DUF87
nSTAND1
AAA_25
AAA_5
NACHT
APS_kinase
Mg_chelatase
AAA_23
AAA_33
Sigma54_activat
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
WCT78566
LinkDB
All DBs
Position
complement(1373455..1375227)
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AA seq
590 aa
AA seq
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MSAPHIEVSGLTVAVGDVPIVSDISFAVPRGQVLALIGESGSGKSTTALALMGWCRHGGR
IAGGTIRVGGMVIEGKSEEELSAIRGRHIAYIAQSAAAAFNPSRRIMAQVIEPALIHRIM
TREEAEAKAVDLFRALALPSPETIGERYPHQVSGGQLQRLMAAMALITDPELVILDEPTT
ALDVTTQVEVLKCFKAALAHCNHGRGATAIYVSHDLAVVAQMADRIAVLLKGRLVEEGPA
EQVLTAPRDAYTQVLVNAPHPVPAAPAGDDAAPVLSVRGLTAGYGRVVDGMPQIPVLRDV
AFDLPAGGALGIIGESGSGKSTLARVIAGLLPAAQGKVLLNGSALPPRLEDRSLDQFRTV
QLVFQNADTALNPAHSVRRILARPLQHYHGLTGSAADRRVAELLDLTRLPPEVIDRPVTK
LSGGQKQRVNLARALAAEPKVLLCDEVTSALDTVVGAAILSLIEDLRRDLGLATVFISHD
IHAVSALCEKVLVLYGGTPVELATRAAFNGPRHHPYTELLKSSLPTMDPRWLDTTRAPIL
RGFRIEGLCPFQPRCADAVPGLCDAVPAPVREGDGMRWLCHHSPSFKEPA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctcatatcgaagtttccggcctgaccgtggccgtgggcgatgtgccgatt
gtctcggacatttcctttgccgtgccgcgtgggcaagtgctggcgctgatcggtgaatcc
ggttcgggcaagagcacgaccgcgctggcgctgatgggatggtgccgccacggcgggcgc
atcgcgggcggcacgatccgcgtgggcggcatggtcatcgagggcaagagcgaggaagag
ctctccgcgatccggggccgccatatcgcctatatcgcccaaagcgcggcggcggccttc
aacccttcgcgccggatcatggcgcaggtgatcgaaccggccctgatccaccgcatcatg
acgcgcgaagaggccgaggccaaggcggtggacctgttccgcgcgctggccctgccctcg
cccgaaacgattggcgagcgctatccgcatcaggtgtcgggcgggcaattgcagcggttg
atggccgccatggcgctgatcaccgatcccgaactggtgatccttgacgagccgaccacc
gcgctggacgtgaccacccaggtcgaggtgctgaaatgcttcaaggccgcgctggcccat
tgcaaccatggccggggcgccaccgcgatctatgtcagccatgatcttgccgtggtggcc
cagatggccgaccgcatcgccgtgcttttgaaagggcggctggtcgaggaaggtccggcc
gagcaggtgctgaccgcgccgcgcgatgcctatacgcaggtgctggtcaatgcgccccat
ccggtgcctgccgcgcctgcgggcgatgatgctgcaccggtgctctcggtgcgggggctg
acggcgggctatgggcgcgtggtcgatgggatgccgcaaatcccggtgctgcgcgatgtg
gcgtttgatctgcctgcgggcggcgcgctgggcatcattggcgaaagcgggtcgggcaaa
tcgacgctggcccgtgtgatcgccgggctgctgcccgccgcgcagggcaaggttctgctg
aacggcagcgccctgccgccacggctggaggatcgcagtctcgaccagttccgcaccgtg
caactggtgtttcaaaacgccgataccgcgctcaatccggcgcatagcgtgcggcgcatc
cttgcccgccccttgcagcattaccacgggctgacaggcagcgcggcggatcggcgggtg
gccgaactgctcgacctgacgcgcctgccgccagaggtgatcgaccggcccgttacgaaa
ctttcgggcggccagaagcagcgcgtcaaccttgcccgcgcgctggcggccgaaccgaaa
gtattgctctgcgacgaggtgacatccgcgctcgatacggtggtgggcgccgcgatcctt
tcgctaatcgaggatctgcgccgcgatctggggctggccacagtgtttatcagccatgac
atccatgccgtctcggccctgtgtgaaaaggtgctggtgctctatggcggtacgccggtc
gaactggccacgcgcgcggcgttcaacgggccgcgccatcatccctataccgaattgctc
aaatccagcctgcccacgatggacccgcgctggctggacaccacgcgcgcgccgatcctg
cgcggtttccggatcgaggggctttgcccgttccagccgcgctgcgccgatgccgttccg
ggcctgtgcgatgccgttcccgcgcctgtgcgcgagggcgatggcatgcgctggctgtgt
caccattcccccagcttcaaggaaccagcatga
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