Novosphingobium humi: PQ457_10620
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Entry
PQ457_10620 CDS
T08806
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nhum
Novosphingobium humi
Pathway
nhum03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PQ457_10620 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nhum03011
]
PQ457_10620 (rpsA)
Ribosome [BR:
nhum03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PQ457_10620 (rpsA)
Bacteria
PQ457_10620 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
RuvA_N
SH3_16
MazE_antitoxin
CsrA
Motif
Other DBs
NCBI-ProteinID:
WCT76397
LinkDB
All DBs
Position
2259555..2261258
Genome browser
AA seq
567 aa
AA seq
DB search
MSTPTRDDFAALLDESLGGAANGGFEGRVVKGTITAIENDKAVIDVGLKSEGRVPLREFA
MAGQPHGLKVGDEVEVFVDRVENADGEAMLSRDRARREAAWDKLENEFGEGKRVEGVIFG
RVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLLDVPQPFQILKMDRRRGNIVVSRRAVL
EETRAEQRSGLIQNLSEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRVNHPSEV
IAIGDTVRVQIVRINQDTQRISLGMKQLESDPWDGVAAKYPVGAKLRGTVTNITEYGAFV
ELEAGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVLVLEVDSDKRRISLGLKQAQQNPW
EAFAERHPVGSSVEGEVKNATEFGLFIGLDGEVDGMVHMSDIAWGISGEDALALHRKGES
VKAIVLDVDIEKERISLGIKQLEKGAPAAGGVSTAAGSNLKRNEVVTVTVLEVRDGGLEV
QAGDDGATGFIKRSDLGRDRDEQRPDRFQVGQKIDAMVTGFDRSKKPSFSIKARQLHEEK
EAVEQYGSSDAGASLGDILGAALKAKQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccgacccgcgacgatttcgcggctctccttgacgaatcgcttggcggcgcc
gccaacggtggctttgaaggccgcgtagtcaagggcaccatcaccgctatcgaaaacgac
aaggccgtcatcgacgtaggccttaagagcgaaggccgcgttccgctgcgcgaattcgcc
atggccggccagccccacggtctgaaggtcggcgacgaagtcgaagtcttcgttgaccgc
gtcgaaaacgccgacggcgaagccatgctcagccgcgaccgcgcccgccgcgaagccgcc
tgggacaagcttgaaaacgaatttggcgaaggcaagcgcgttgaaggcgtcatcttcggc
cgcgtcaagggcggcttcaccgtcgacctcgacggcgccgtggccttcctgcccggctcg
caggtcgacatccgccccgtgcgcgacgtcaccccgctgctcgacgttccccagccgttc
cagatcctcaagatggaccgtcgccgtggcaacatcgtcgtgtcgcgccgcgccgttctg
gaagagacccgcgccgaacagcgcagcggcctgatccagaacctgtcggaaggccagatc
atcgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgacctgggcggcatc
gacggcctgctgcacgtcaccgacatgagctacaagcgcgtgaaccacccgagcgaagtg
atcgccatcggcgacaccgtccgcgtgcagatcgtccgcatcaaccaggacacgcagcgc
atcagcctgggcatgaagcagctggaatcggatccgtgggatggcgttgccgccaagtac
ccggttggcgccaagctgcgcggcaccgtgaccaacatcaccgaatatggtgcgtttgtc
gaactggaagccggcatcgaaggtctggtccacgtttcggaaatgtcctggaccaagaag
aacgtccaccccggcaagatcgtttcgacctcgcaggaagtcgacgtgctggtgctggaa
gtcgattcggacaagcgccgcatcagcctcggcctcaagcaggcccagcagaacccgtgg
gaagctttcgcagagcgtcaccctgttggttcgagcgtcgaaggcgaagtcaagaacgcc
accgaattcggcctcttcatcggtctggacggcgaagtcgatggcatggtccacatgtcg
gacatcgcctggggcatctcgggcgaagacgcgctggcgctgcaccgcaagggtgaaagc
gtcaaggcgatcgttctggacgtggacatcgaaaaggaacgcatcagcctgggcatcaag
cagctcgaaaagggcgccccggctgccggcggcgtttcgaccgctgctggttcgaacctg
aagcgcaacgaagttgtcaccgtgaccgtgctcgaagtgcgtgacggcggcctcgaagtg
caggctggcgacgatggcgccaccggcttcatcaagcgttcggatctgggtcgcgaccgc
gacgaacagcgccccgaccgcttccaggtcggtcagaagatcgacgccatggtcaccggt
ttcgaccgttcgaagaagcccagcttctcgatcaaggcgcgtcagctgcacgaagaaaag
gaagccgtcgaacagtacggttcgtcggatgccggcgcttcgctgggcgacatcctgggc
gccgctctgaaggccaagcagtaa
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