Novosphingobium humi: PQ457_11465
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Entry
PQ457_11465 CDS
T08806
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nhum
Novosphingobium humi
Pathway
nhum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PQ457_11465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhum03021
]
PQ457_11465
03400 DNA repair and recombination proteins [BR:
nhum03400
]
PQ457_11465
Enzymes [BR:
nhum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PQ457_11465
Transcription machinery [BR:
nhum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PQ457_11465
DNA repair and recombination proteins [BR:
nhum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PQ457_11465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WCT76551
UniProt:
A0ABY7TU68
LinkDB
All DBs
Position
complement(2439320..2440381)
Genome browser
AA seq
353 aa
AA seq
DB search
MTVNIKNWQELKKPNSLEVKPGNDPKRRATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPGEVRAGDI
AVTGDIEVMNKDLVICHLDEGATLNMELTADSGKGYVPAVQNRPIDAPIGLIPVDSLYSP
VRQVSYKVDNARIGQELDYDKLSLSVETDGTVAPEDAVAYAARILQDQLALFVHFEDIAP
VGAAPMIGGIAAAAPEEGDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatcaagaactggcaggaactgaagaagcccaacagcctcgaagtcaag
ccggggaacgaccccaagcgccgcgcgactttcgtcgccgaaccgctggaacgcggtttc
ggtctgacgctgggcaatgcgctgcgtcgcgtcctgctttcttctctgcagggcgccgcg
atcacctcgatcaagatcgagaacgtgctgcatgagttcagctcgctggccggtgtgcgt
gaagacgttaccgacatcgtgctgaacgtgaagcagatcgcgctcaagatgcagggcgaa
ggtccgaagcgcttgcagctctcggccaccggtccgggcgaagtgcgcgctggcgatatt
gcagtgacgggcgatatcgaggtcatgaacaaggacctcgtgatttgccacctcgacgaa
ggtgcaacgctgaacatggaactgaccgcagacagcggcaagggctatgtgccggcggtg
cagaaccgtccgattgatgcaccgattggtctcattccggtcgactcgctttactcgccg
gtgcgtcaggtcagctacaaggttgacaatgcgcgtatcggtcaggaactggactatgac
aagctgagcctttcggtggaaaccgatggtacggtggctcctgaagacgcggtggcctat
gctgcgcgcattctgcaggaccagttggctctgttcgtccacttcgaggatattgctccg
gttggcgcggctccgatgattggcggcattgctgctgctgctccggaagaaggcgacacg
aatcagctcaaccgttaccttcttaagaaggtggacgaactggaactgtcggtccgctcc
gccaactgtctcaagaacgacaacatcatctatatcggcgatctggttcagaagaccgaa
gccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtg
ctctcttcgatgggtctgcgtctggggatggatatccccggttggccgcctgagaacatc
gaggaaatggccaagaagctcgaacaggagcttctgggctaa
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