Novosphingobium humi: PQ457_12455
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Entry
PQ457_12455 CDS
T08806
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nhum
Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nhum03009
]
PQ457_12455 (rimO)
Enzymes [BR:
nhum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PQ457_12455 (rimO)
Ribosome biogenesis [BR:
nhum03009
]
Prokaryotic type
ribosomal protein modification factors
PQ457_12455 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WCT76734
LinkDB
All DBs
Position
2647509..2648891
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AA seq
460 aa
AA seq
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MSDKLTKIPESPKVGMVSLGCPKALVDSERILTRLRADGYAFAPDYVGADVVLVNTCGFL
DSAKEESLAAIGEAIAENGRVIVTGCMGNEAEVIRARFPDVLAVTGAHQYEQVVDAVHEA
APPTRGPFVDLIPAGADGEVKLTPRHYSYLKISEGCNHSCAFCIIPQLRGKLASRRIDAV
LREAEKLVASGTKELLVISQDTSAYGVDIRHESRTWKDREVRAHMTDLARELGQLRTPEG
EAPWVRLHYVYPYPHVDDVIPLMAQGLITPYLDIPFQHAAPNVLRAMKRPANEARVLERI
KKWREICPDLAIRSSFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVEGASANDLP
GAVPEAVKEERYARLMEKTEAISAARLQAKVGRVIRVIIDEVGEPDEDGDIGATGRSQAD
APEIDGQVLLRNVPQDLKSGDIVDVRIEDADAHDLFGVIA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagctgacaaaaattcccgaatcccccaaggttggcatggtcagcctcggc
tgccccaaggctctggtcgacagcgagcggatcctcacccgcctgcgcgccgatggctat
gcgtttgcgcccgattatgtcggggccgacgtggtgctggtcaacacctgcggctttctc
gattcggccaaagaggaatctttggccgcgatcggtgaggcgattgccgaaaacggccgc
gtgatcgtcaccggctgcatgggcaacgaggccgaggtgatccgcgcccgcttccccgat
gtgctggccgtgaccggcgcgcatcagtatgagcaggtggtggacgccgtccatgaggcc
gccccgcccacgcgcgggcctttcgtcgatctgatcccggcgggggccgacggcgaggtc
aagctgaccccgcgccactattcctatctcaagatttcagaaggttgcaaccattcctgc
gccttctgcatcatcccgcaactgcgcggcaaactggccagccgccgcatcgacgcggtg
ctgcgcgaggccgaaaaactggtggcttcggggacgaaggagctgctggtcatctcgcag
gacacttcggcctatggggtggatattcgccacgagagccgcacgtggaaggaccgcgag
gtccgcgcccatatgaccgatctggctcgcgaactgggccaattgcgcacaccagagggt
gaagccccgtgggtgcgtctgcattatgtctatccctatccgcatgtcgatgatgtcatc
ccgctgatggcgcaggggctgatcacgccctatctcgacatcccgttccagcatgccgcg
cccaacgtccttcgcgcgatgaagcgcccggccaatgaggcgcgcgttctggaacgcatc
aagaaatggcgcgaaatctgccccgatctggcgattcgctcctccttcgtggtcggcttc
cccggcgagacggaggaggatttccaatatctgctcgattggctggacgaggcgcaattg
gaccgcgtgggcgccttccggtttgagccggtcgagggcgcgagcgccaatgacctgccc
ggcgccgtgcccgaggcggtcaaggaagaacgctatgcccgcctcatggaaaagaccgag
gcgatcagcgccgcgcggcttcaggccaaggtgggccgcgtgattcgcgtcatcatcgac
gaagtgggcgaaccggacgaggatggcgacatcggcgccaccggccgcagccaggccgac
gcgcccgagatcgacggacaggtgcttttgcgtaatgtgccgcaggatctgaaatcgggc
gatatcgttgatgtcagaatcgaagatgctgatgcacatgacctttttggggtgattgca
tag
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