Novosphingobium humi: PQ457_13835
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Entry
PQ457_13835 CDS
T08806
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nhum
Novosphingobium humi
Pathway
nhum00061
Fatty acid biosynthesis
nhum00071
Fatty acid degradation
nhum01100
Metabolic pathways
nhum01212
Fatty acid metabolism
nhum02024
Quorum sensing
nhum04146
Peroxisome
Module
nhum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PQ457_13835
00071 Fatty acid degradation
PQ457_13835
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PQ457_13835
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQ457_13835
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nhum01004
]
PQ457_13835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nhum04147
]
PQ457_13835
Enzymes [BR:
nhum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PQ457_13835
Lipid biosynthesis proteins [BR:
nhum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PQ457_13835
Exosome [BR:
nhum04147
]
Exosomal proteins
Exosomal proteins of breast milk
PQ457_13835
Exosomal proteins of breast cancer cells
PQ457_13835
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AAA_lid_6
Motif
Other DBs
NCBI-ProteinID:
WCT76991
UniProt:
A0ABY7TWL1
LinkDB
All DBs
Position
2938389..2940059
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AA seq
556 aa
AA seq
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MIATDDAKTFGQKGWMPQARLITDLLDKAVEHHAERIALDFLGRTWTYGEVGRLADRAAR
GLYALGLRKGDRFALCLPNTPYFVVMYFAALKIGAVIVNLNPMYTPREMDHLIRDSGARM
IAVPDVASIYAKVREVGPAAGIEKIVMCPLAPILPTLQSLGWRVLKRREHARYSEDDLHI
GFFRLIERKGDMPAIERDPHDLAVLQYTGGTTGTPKGAMLSHANLTANSAQMLMHMGHDP
SEQERVLGVLPMFHVFALTTVLNFSVEIAAQIVLLARFDLKQMLGTIKRTRPTIIFGVPT
IWVAMNNDVAPGEAPDLSHLSACVSGGAPLPLDVRQAFEKLTGAIITEGYGLSEASPIIT
CNPINGRIKANSCGPAFPATIIEIRNPESGEILPIGERGEVCARGPQVMKGYWNRPEDTE
KTFVDGALRTGDIGYLDDEGYLFLVDRMKDVILCGGFNVYPRVIEDAAYHHPAVEEAIAI
GIPDAYRGQSPKLFIKLHAGMTATPQELLAFLGDYLNKIEIPKEIEIRDHLPRTLVGKLS
KKELVEEERRKREGQP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaacggatgatgccaagacctttgggcagaaagggtggatgccgcaggcgcgg
ctgatcaccgatctgctggacaaggcggttgagcatcacgccgaaaggatcgcgctcgac
tttctgggccgcacatggacctatggcgaggttgggcgtctggccgaccgggcggcgcga
gggctttacgcgctgggcctgcgcaagggggatcgctttgcgctgtgcctgcccaacacg
ccttatttcgtggtcatgtattttgccgcgctcaaaatcggggcggtgatcgtcaatctc
aacccgatgtataccccgcgtgagatggatcacctgatccgcgattccggggcgcggatg
attgccgtgcccgatgtggccagcatctatgccaaggtgcgcgaggtcggcccggcggcg
ggcattgaaaagatcgtgatgtgtccgctcgcccctatcctgcccacgctgcaatccttg
ggctggcgggtgctcaaacggcgcgaacatgcgcgctattccgaggatgatctgcatatc
ggcttcttccgcctgatcgagcgcaagggcgatatgcccgccatcgagcgcgatccccat
gatctggccgtgctgcaatataccgggggcaccaccggcacgcccaagggcgcgatgctc
agccatgccaatctgaccgccaattcggcgcagatgctgatgcatatgggccatgatccg
tccgagcaggagcgcgtgctgggcgtgctgccgatgttccatgtctttgcgctgaccacg
gtcttgaacttttcggtcgagatcgcggcgcaaatcgtgctgctggcccgatttgacctg
aaacagatgctgggcacgatcaagcggacgcggcccacgatcatctttggcgtgcccacg
atctgggtggcgatgaacaatgacgtggcgccgggcgaagcgcccgacctgtcgcatctc
tcggcctgcgtttcgggcggggcgccgcttccgctggacgtgcgtcaggcgtttgaaaag
ctgacgggcgcgatcatcaccgagggctatggcctgtcggaggccagccccatcatcacc
tgcaacccgatcaacgggcggatcaaggccaatagctgcggcccggcctttccggccacg
atcatcgagatccgcaacccggaaagtggcgaaatcctgcccatcggcgagcgcggcgaa
gtctgcgcgcgcgggccgcaggtgatgaagggctattggaaccggccggaggacaccgaa
aagacctttgtcgatggcgcgctgcgcacaggcgacatcggctatctcgatgatgagggc
tatctcttcctggtcgaccggatgaaggatgtcatcctgtgcgggggctttaacgtctat
ccgcgcgtgatcgaggatgccgcctatcaccaccctgcggtcgaggaagccatcgccatc
ggcattcccgacgcctatcgcgggcaaagccccaaattgttcatcaagctgcacgccggg
atgacggccacgccgcaggaattgctggccttccttggcgactatctcaacaagatcgag
atccccaaggagatcgagatccgcgaccatctgccgcgcacgctggtgggcaaattgtcg
aaaaaggaactggtggaggaggagcgccgcaaacgcgagggtcagccctga
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