KEGG   Novosphingobium humi: PQ457_14845
Entry
PQ457_14845       CDS       T08806                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
nhum  Novosphingobium humi
Pathway
nhum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nhum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PQ457_14845 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nhum03400]
    PQ457_14845 (ruvB)
Enzymes [BR:nhum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PQ457_14845 (ruvB)
DNA repair and recombination proteins [BR:nhum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PQ457_14845 (ruvB)
    RecFOR pathway proteins
     PQ457_14845 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_17 AAA_3 AAA_14 AAA_22 AAA_16 RNA_helicase Rad17 TsaE AAA_18 nSTAND3 NTPase_1 AAA_28 AAA_24 AAA_33 ABC_tran Bac_DnaA PEPCK_ATP NB-ARC NACHT
Other DBs
NCBI-ProteinID: WCT77176
LinkDB
Position
complement(3164084..3165124)
AA seq 346 aa
MTDNPLLSAHRQIEDMDAALRPKSLAEFVGQAAAKDNLHVFIESAKSRGEALDHTLFFGP
PGLGKTTLAQIIARELGVNFKATSGPVIAKAGDLAALLTNLEHGDVLFIDEIHRLNPVVE
EVLYPAMEDRALDLMIGEGPSARSVRIDLPPFTLIGATTRAGLLQTPLRDRFGIPVRLQF
YSVDELERVISRGAGLLGIGIAAEGAREIARRSRGTPRVAGRLLRRVRDFAHVAGSEVIT
QSIADNALTRLEVDNAGLDAQDRRYLTMIADIYKGGPVGADTLAAGLSEPRDTIEEVIEP
YLIQLGMVARTARGRCLNDRGWQHLGLTPPSGQGAQGGLFDAGEGE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaccgataaccccctcctttccgcccatcgccagatcgaggatatggacgccgcgctg
cgtccgaaatctctggccgaattcgtggggcaggcggcggccaaggacaacctccacgtc
ttcatcgaatcggccaaatcgcgtggcgaggcgctcgatcacacgctgtttttcggcccg
ccggggctgggcaagaccacgctggcgcagattatcgcgcgcgagctaggcgtcaatttc
aaggccacctccggcccggtgatcgccaaggcgggcgatctggccgcgctgctgaccaat
cttgagcatggcgatgtgctgttcatcgacgaaatccaccgcctcaatccggtggtcgag
gaagtgctgtaccccgcgatggaggaccgcgcgctcgacctgatgatcggcgaaggccct
tcggcgcgctcggtgcggatcgacctgccgcctttcacactgatcggcgcgaccacgcgc
gcgggcctgctgcaaacgcctttgcgcgaccgtttcggcattccggtgcggctgcaattt
tacagtgtggatgagcttgaacgcgtgatctcgcgcggggcgggcctgctgggcatcggc
attgccgccgagggcgcgcgagagatcgcccgccgttcgcgcggcacgccgcgcgtggcc
gggcgcctgctgcgccgcgtgcgcgatttcgcccatgttgcgggcagcgaggtgattacc
cagtctattgccgacaatgcgctgacccggctcgaggtcgacaatgcggggctggatgcc
caggatcgtcgctatctgacgatgatcgccgatatctacaagggcgggccggtgggggcc
gacacgctggccgcgggcctgtctgagccgcgcgatacgatcgaagaggtgatcgagccc
tacctgatccagcttggcatggtggcgcgtaccgcgcgcgggcgctgtctgaatgaccgt
ggctggcagcatcttggcctgacaccgcccagcgggcagggcgcgcagggcgggctgttt
gatgccggcgaaggcgaataa

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