Novosphingobium humi: PQ457_15005
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Entry
PQ457_15005 CDS
T08806
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nhum
Novosphingobium humi
Pathway
nhum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ457_15005 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhum03019
]
PQ457_15005 (recQ)
03400 DNA repair and recombination proteins [BR:
nhum03400
]
PQ457_15005 (recQ)
Enzymes [BR:
nhum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ457_15005 (recQ)
Messenger RNA biogenesis [BR:
nhum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQ457_15005 (recQ)
DNA repair and recombination proteins [BR:
nhum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQ457_15005 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCT77206
UniProt:
A0ABY7TVF2
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All DBs
Position
3199639..3201423
Genome browser
AA seq
594 aa
AA seq
DB search
MTTQTLHNPLDTLQQIFGFPAFRGVQEDVVTRILAGQSTLAVMPTGAGKSLTYQLPAVMM
PGVCVVISPLIALMHDQLRSASANGIRAASLTSADTDRGATMAALRDGALDLLYVAPERA
SQPHFRELLEQSHIGLFAIDEAHCVSQWGHDFRPDYRLLRPLMDAFPDVPRLALTATADA
HTRGDILEQLGIPGDGLIVSGFDRPNIQYRIAPRDNPLSQIKTLMAEVPGPGIVYAGTRA
GVEKLAEQLGATGRRVLPYHAGLPPEMRAANQAAFVASEDMVMVATIAFGMGIDKPDVRF
VAHAGLPKSIEAYYQETGRAGRDGEPAVALMLWGAEDFVRARQRIAEVEPERQPGERTRL
DSMAGLVETAGCRRALLRRHFGEDAPAHCGNCDNCLNPPKVIEVTELAQKLLSGVYRTGQ
RFGLGYVSNVLTGADDDMIRQRGHDTLSVHGIVSGEESALLRPLARALQARGCLEATEHG
GLQLAGDARAILRGEMAMVMAEPPARTRSGSRRDRGASPNPSGDPLFEALRALRRDLAAE
AKVPPYVIFNDATLRQMAAERPVSMHEMAQISGVGARKLEAYGEAFLRAIRDHG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacacaaaccctccacaacccgctcgacacgctgcaacaaattttcggcttcccg
gcctttcgcggagtgcaggaggatgttgtcacccgcattctggcgggccagtcgacgctg
gcggtgatgcccacgggcgcgggcaaatcgctgacctatcaattgcctgcggtgatgatg
ccaggggtctgcgtggtgatttcgccgctgattgcgctgatgcacgaccaattgcgctcg
gccagcgccaatggcattcgcgccgccagcctgaccagcgcggacacggaccggggcgcc
acgatggcggcgctgcgcgatggcgcgctcgacctgctctatgtcgcgcccgaacgcgcc
agccagccgcatttccgggaactgctcgaacaatcccatatcggcctcttcgccatcgac
gaggcgcattgcgtgtcgcaatggggccatgatttccggcccgattaccggctgctgcgc
ccgctgatggatgcctttcccgatgtgcctcgactggcgctgacggccacggcggacgcg
catacgcgcggcgatattctcgaacaattgggcattccgggcgacgggctgatcgtgtcg
ggctttgaccggcccaatatccaatatcgcattgccccgcgcgacaatcccctttcccag
atcaaaacgctgatggccgaggttcccggccccggcatcgtctatgccggaacgcgcgcg
ggcgtggaaaaactggccgagcaactgggcgcgaccgggcggcgggtgctgccctatcac
gcgggcctgccgcccgagatgcgcgccgccaatcaggccgcctttgtcgccagcgaagac
atggtaatggtggccaccatcgcctttggcatgggcatcgacaagccggacgtgcgcttt
gtcgcccatgcgggtctgcccaaaagcattgaggcctattatcaggaaacgggccgcgcg
gggcgcgatggcgaaccggcggtggcgctgatgctgtggggggcggaggatttcgtccgc
gcccgccagcgcatcgccgaggtcgaacccgaacgccagccgggcgagcgcacaaggctc
gacagcatggcggggcttgtcgaaacggcggggtgccgccgcgcccttttgcgccgccat
ttcggcgaggatgcgcccgcccattgcggcaattgcgacaattgcctcaacccgcccaag
gtgatcgaggtgacggagttggcgcaaaagctgctctcgggcgtctatcgcaccggacag
cggtttgggctgggctatgtttccaatgtgctgaccggggccgacgacgatatgatccgc
caacgcggccatgacacgctctcggtccatggcattgtttcgggcgaggaatccgcgctg
ctccgcccgctggcccgcgctttgcaggcccgcgggtgcctggaggcaaccgaacatggc
gggctgcaactggcaggcgatgcgcgtgcgattttgcgcggcgaaatggcgatggtcatg
gccgagccgcccgcgcgcacgcgttccggcagtcgccgcgaccggggcgcctctccgaac
cccagcggcgatcccctgttcgaggcgctgcgcgcgctgcgccgcgatctggccgccgag
gccaaagtgccgccctatgtcatcttcaacgacgccaccctgcgccagatggccgccgag
cgccccgtctcgatgcatgaaatggcgcagatctcgggcgtgggcgcgcgcaagctggag
gcctatggcgaggctttcctgcgcgccatccgtgaccatggatga
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