Novosphingobium humi: PQ457_18785
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Entry
PQ457_18785 CDS
T08806
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
nhum
Novosphingobium humi
Brite
KEGG Orthology (KO) [BR:
nhum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nhum03036
]
PQ457_18785
Chromosome and associated proteins [BR:
nhum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
PQ457_18785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCT80105
UniProt:
A0ABY7U3N3
LinkDB
All DBs
Position
unnamed1:complement(648849..653147)
Genome browser
AA seq
1432 aa
AA seq
DB search
MNIPQLALLPATDTASRLYGAAQSLVLRWRGGGTVTRQYLKRLMIEAFGSDDADGVWSMR
DAYDALEAAQVLMLAQPDCPLVDHASPAEIFTRLTAFERALPTQTYRSEHQVKFQQFSTP
LRLAWLAALAGQARPDDIGLEPSAGTGMLAVHMLRVGAEVMLNEFDGRRADLLGRILDQK
VTRHDGEHIGDLISASPRPTLILINPPFSRSAGRGVDQHAGARHLRAALARLAPGGRCVA
IMPPNFAAGGAAVLGYATVTEMVPPRAEITICGHPYAKHGTSIGVNLLVFDKGWAGEPQR
YEADTIDDVLPLVQAIPPRLGSGNPLPPPTAVTIARPAPSSRPSHAFRPSPAALIGKTPS
RRLVPPSRILAESDLPEPLVYQLLDAPLAPGEPVGIYSPWRLARIAIPEVASHPDDLVES
IAMASIPPPAPMHRPLLQRRAIRALSDAQLETVILAGEAFSRDLPGRFLPNSAGDRLEER
ADGHIYRTGFFIGDGTGVGKGREVAACIFDRWNRGYRKAIWVSRSTALLEDARRDHSALG
GLPIDIQPIDGFPPGSPITMTSGILFLTYAALRSARHDKQSRLQQIIAWAGEDFEGILVF
DEAHEMGNAAGTDSEFGSARGSEQGLAGVRLQNALPRACVLYASATGATKPENLSYASRL
GLWGPGTAFADRDLFLSSMEEGGVAALEIVARDLKAMGLYTARALSFAGVEYEPLVHQLT
SEQIAIYDAFADAWAIVHRHLESVLKATNIVDRISGATLNSRAKGSALSRFESSKQRFWL
ALLVAMKMPTLLPEIEKEIAKGQVAVIQLVTTAEAILERRLAELPAEERANLSLDVSPLE
ILVEYLRHAFPVRQMAVFRTSDGADKSEPMVDALGEPVLSQEALAAREELIEQLCAMPAV
PAALDTLIAHFGTDRVAEVTGRSRRLVVRPDGGQAIERRSARANLAETSLFMDGTKPILV
FSSAGGTGRSYHADRSCKTANKRRIHFLLEPGWRADVAIQGLGRSHRTNQTFPPVFRPVV
TDCKGERRAISTIARRLDSLGALTRGQRQTGGQGMFDPSDNLESDLAREALSQWYRLLHG
GKLTSVRLAAFQEMTGLKLVDDEGILLERLPPIQRWLNRLLALRIAVQDAIFEEYMGLIQ
ARADAAREAGTLDVGVETIRAERIVILTDQCLRTDPRTGAETRLLHLELHLKPRVTRWTR
LMRIWGNREGVAFLRNARSGRVALAVPSWSITDEEGRVVAMLSLERPTGSSRISEADLTA
SHWASIEPDKFETLWEAECQEALTQVEIEIVHVATGLLLPVWHKLPSDDVRVWRIDDGAK
VTILGRIIHPRTLGKLQEAFGLDGSALALTPDELLRGAEAVEGVAIPGLEGARLVTALVN
GSHRLEIRDYPPERRNWLKSCGAFSEVLAFKTRLFLPPNQVVEILRAIASVQ
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgaatattccccagcttgccctgttgccggcgaccgatacggcgtcgcgtctgtacggg
gctgcgcaatctctagttctacgctggcgcggcggaggaaccgtcacgcgccagtacctc
aagcgtcttatgatcgaagcctttggctctgacgatgccgatggtgtctggtccatgcgc
gatgcctatgacgccctcgaagcggcccaggtgctgatgctcgcgcagcccgattgcccg
ttggttgaccatgcgtctccggctgaaatcttcaccaggctgaccgctttcgaacgcgcc
ctgccgacacagacctatcgctccgagcatcaggtcaaatttcagcaattcagcacgcct
ttgcgccttgcctggcttgccgcgctcgccgggcaagctcgccccgatgatatcgggctc
gaaccatcggctgggaccggcatgctggccgtccatatgctgcgggtgggcgcggaagtc
atgctcaatgagtttgatggcaggcgcgccgatcttcttggccgcatcctcgatcagaaa
gtcacccgccacgatggcgagcatatcggcgatctcatctcggcctcaccgcgcccgaca
cttatcctgatcaacccgcccttcagccgcagcgccggacgcggcgtggatcaacatgcc
ggcgcccgccatctgcgagcggccctcgccagacttgcgccgggcgggcggtgcgtggcg
atcatgccgcccaatttcgcagccggcggggcggctgtgctgggctatgccaccgttacc
gaaatggtgccgccgcgcgcggaaatcaccatttgcgggcatccctatgccaaacacgga
acgtccatcggggtaaacttgctggtcttcgacaaaggctgggccggcgagccccagcgt
tacgaggcggacacgatcgatgatgtgcttcctcttgtacaggcgataccgcccagattg
ggttcgggaaatccgctgcctccgcccacggcggtgaccatcgcccgcccagcgccctca
tcgcgtccgtcacacgcatttcgtccatcacctgccgctttgatcggcaagactccgtct
cgtcgactggtgccgccgtcccgcatcttagcagaaagtgacctgcctgaacctctggtc
tatcagctcctcgacgcgccacttgcgcctggtgagccggtcggcatctattcgccctgg
cgtctggcacggattgcgatccccgaggtggcgtcgcatcccgacgatcttgtcgaatcg
atcgccatggcgtcgatcccgccgcccgcgccgatgcatcgccccttgctccagcgccgc
gcgataagagcgctgtcggatgctcaactcgaaaccgtcatccttgcaggcgaggcattc
tcgcgcgatctgcccgggcggtttttacccaacagcgcgggcgaccgcctcgaagagcgt
gccgatggccatatctatcgcaccggcttcttcatcggtgacggcaccggtgtgggcaag
ggaagggaggtggcggcctgcatcttcgaccgttggaaccgagggtatcgcaaggctatc
tgggtgagtcgctcaaccgccctcttagaagatgccagaagagaccattccgctctgggc
gggctgcccatcgatatccagccgatcgacggttttccgcctggaagcccgatcaccatg
accagcgggatcttgtttctcacctatgcggccctccggtccgctcgccatgacaagcaa
tcgcggctgcaacagattattgcctgggcaggcgaggacttcgaggggatcctggttttc
gatgaggcccatgagatgggcaacgctgccggcacggatagtgagtttggttctgcgcgc
ggctccgagcaagggttggccggtgttcgcctgcaaaatgctttgccccgagcctgcgtg
ctctatgcatcagctaccggggcgacgaagccggaaaatctgagctatgcctctcgtctc
ggcctttgggggccgggcaccgcctttgcggatcgcgatctgttcctgtcttccatggag
gaaggcggcgtggctgccttggaaatcgtggctcgcgacctcaaagccatgggtctgtac
acggcgcgggctctgagctttgccggtgtcgagtatgagccgctggttcatcagctcacc
tccgagcagatcgccatttacgatgccttcgcggacgcatgggccatcgtgcatcggcat
ctcgaatcggtgctcaaggcgacaaacatcgtcgatcgcatatcgggcgcgaccctcaat
tcccgcgccaagggatcggcgctcagccggttcgaaagttccaaacagcggttttggctg
gctcttttggtggccatgaaaatgccgacgctgctgcccgagatcgaaaaggaaatcgca
aaggggcaggtcgccgttatccagctggtgacaaccgccgaggccattctcgagcggcgg
cttgccgaactgcccgcagaggaacgggccaacctgtctctcgatgtctcgccgctcgag
atccttgtcgaatatctgcgccatgcctttcccgtccgccagatggcggtgttccgcacg
agcgatggcgccgacaagtccgaaccgatggtcgatgctttgggcgagcctgtgcttagc
caggaagcactcgccgcacgtgaagaactgatcgagcaactttgcgccatgccggcggtg
cccgccgcgctcgacacgctgatcgcccactttggcaccgaccgcgttgccgaagtcacc
ggccgctcgcgccgccttgtcgtcagacccgatggtgggcaggccattgagagacgcagc
gcccgggccaatcttgctgaaaccagcctgttcatggatggtaccaagcccatcctggtc
ttcagttcggccggaggcactggacgctcctatcacgcggaccgatcttgcaaaacggcg
aacaaacgccgcatccacttcctgctcgagccgggctggcgagctgacgttgcgatccag
ggacttgggcgcagccaccgcaccaatcagacctttcccccggtctttcgcccggtggtg
accgattgcaaaggtgagcggcgtgccatctcgacgattgcgcggcggctggacagtctt
ggcgcgctgacccgcgggcagcgccagactggagggcagggaatgttcgatccatcggac
aatctggaaagtgacctggcacgcgaggctctctcccagtggtaccggctactccacggc
ggcaagctgaccagtgtcagactggccgcgtttcaggaaatgaccggtcttaaactggtc
gatgatgaaggcattctgctcgaacggttgccaccgatccagcgttggctgaacaggctg
ttggcgctgcgtatcgcggttcaggacgctatcttcgaggaatatatgggcctgatccag
gcccgggccgatgccgcgcgtgaggcaggtacgctcgatgtcggcgtcgagacgatccgg
gccgagaggatcgtcatattgaccgaccagtgtttgcggaccgatccgcgcaccggcgcc
gagacccgattgctccatctcgagttgcacctcaaacctcgggtgacgaggtggacccgg
ctgatgcggatttggggaaaccgcgagggcgttgccttcttgcgcaatgcgcggtcggga
cgcgttgctctggcggtgccttcatggtcgatcaccgatgaggaggggcgtgtcgttgcc
atgctatcgctcgagcggccgaccggttcctcacgcataagcgaggccgatctgaccgcg
agccattgggcttctatcgagcccgataaatttgagaccctatgggaagcggagtgtcag
gaggccttgacccaggttgagatcgaaatcgtccatgtcgcaaccggcctccttttgccc
gtctggcacaaattgcccagtgacgatgtccgggtatggcggatcgatgatggcgcgaag
gtcacgattcttggtcgcatcatccatccccgcacgcttggaaagcttcaggaggccttc
ggtctggacggcagcgctcttgctttgacacctgatgagctgctgcgcggcgctgaagcg
gtggaaggcgtggcaatccccgggctggaaggagccagactggtaacggccttggtgaac
ggcagccaccgcctcgaaatccgcgactatcctcctgaacgccgcaactggctcaagtcc
tgcggcgcgttcagcgaggttcttgccttcaagactaggctgtttttgccgcccaatcag
gtagttgaaatcctccgggcgattgcttcggtccagtaa
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