Natronosporangium hydrolyticum: JQS43_02235
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Entry
JQS43_02235 CDS
T07914
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nhy
Natronosporangium hydrolyticum
Pathway
nhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQS43_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhy03019
]
JQS43_02235
03400 DNA repair and recombination proteins [BR:
nhy03400
]
JQS43_02235
Enzymes [BR:
nhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JQS43_02235
Messenger RNA biogenesis [BR:
nhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JQS43_02235
DNA repair and recombination proteins [BR:
nhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JQS43_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QSB17068
UniProt:
A0A895YSR3
LinkDB
All DBs
Position
460230..462434
Genome browser
AA seq
734 aa
AA seq
DB search
MIGAEVACPARLDPAGPGRNGPVSDGPEATSVRQRAEAVLRQLAGESAQLRADQWRAIEA
LVVEQRRVLCVQRTGWGKSAVYFVATALLRGPDAPSPAGPTVIISPLLALMRNQVAAAER
AGIHARTINSANPEEWDEIAAAVHAGAVDVLLISPERLNNPDFRESVLPKLAATTGLLVV
DEAHCVSDWGHDFRPDYRRLRSFLAGLTPGTPVLATTATANARVVTDVAEQLDPAGEAMV
LRGTLDRESLRLAVHELPSPAHRLAWLAEQLDALPGSGIIYTLTVAAAAETAAFLRGRGY
EVAEYSGRTEDADRRAAESDLLANRLKALVATSALGMGFDKPDLGFVIHLGAPPSPIAYY
QQVGRAGRAVESARVLLLPGPEDAAIWRYFASLAFPAEEQVRAVLAALSEADHPLSTAAL
EPRVELRRARLELMLKVLDVDGAVRRVRGGWEATGAQWRYDHERYQQLSRARRVEQDAMR
EYVATAGCRMEYLRRCLDDPYAEACGRCDRCTGDAPPAEVSAAALTAAEAYLGQAGVAVA
PRKMWPTGLPAAGVPLRGKIPAQEQAETGRVVGRLSDLGWGGPLRELLADGAPDQPAPAQ
LLAAVVEVLKAWAHGDDRWPQRPVAVVALGSQQRPKLVQSVAGHVAEVGRLPLLGTVPPG
GSGGGRANSAQRVRALHGSFIVPPAVAGAFAEHPGPVLLVDDYIDSGWTMALVARELRAA
GATAVLPLALAVTG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgctgaagtcgcgtgccccgctcggctcgaccccgccggaccgggtagaaat
gggccggtgagcgacggtccggaggcaacgagcgtgcggcagcgagccgaggcggtgctg
cggcagctggcgggcgagtcggcgcagctgcgcgccgaccagtggcgggcgatcgaggcg
ttggtggtggagcagcggcgggtgctgtgcgtgcagcgcaccggttggggcaagtccgcg
gtctacttcgtcgccacggcgctgctgcgaggccctgacgccccgtcccccgccggcccg
acggtgatcatctcgccgctgctggcgttgatgcgtaaccaggtggcggcggccgagcgg
gccggtatccacgcccgcaccatcaactccgccaacccggaggagtgggacgagatcgcc
gccgcggtccacgccggcgcggtcgacgtgctgctgatctcaccggagcggttgaacaac
cctgacttccgggagtcggtgctgcccaagctcgccgccaccaccggcctgctggtggtc
gacgaggcgcactgcgtctccgactggggccacgacttccggcccgactatcgccggctg
cggtcgtttctcgccggcctcaccccaggtacgccggtgttggcgactaccgccaccgcg
aacgcccgggtggtgaccgatgtcgccgagcagctcgatccggctggtgaggcgatggtg
ttgcgcggcaccctggatcgggagtcgctgcggttggcggttcacgagctgcccagcccg
gcgcaccggttggcctggctcgccgagcagctcgacgcgctgcccggctccgggatcatt
tacaccctgaccgtggccgccgccgccgagaccgcggccttcctgcgcggccgcgggtac
gaggtcgccgagtacagcggccggaccgaggatgccgaccggcgggcggccgagtcggat
ctgctggcgaaccggctcaaggcgctggtcgccacctccgcgctggggatgggtttcgac
aagccggatctcgggttcgtcatccatcttggcgcgccaccgtccccgatcgcgtactac
cagcaggtgggccgcgccggccgggcggtcgagtcggcgcgggtgctgttgctgcccggc
ccggaggacgcggcgatctggcgatacttcgcttcactggcgttcccggcggaggagcag
gtacgcgccgtgttggcagcactgtccgaagcagaccatccgctgtcgacggcagcgttg
gagccgcgggttgagctacgccgggcccgactggagctgatgctgaaggtgctcgatgtg
gacggtgcagtgcgccgggtccgcggcggctgggaagcgaccggcgcgcagtggcgctac
gaccacgagcggtatcagcagctcagccgggcccgccgggtcgagcaggatgcgatgcgg
gagtacgtggcgaccgccgggtgccggatggagtatctgcgccggtgcctggacgacccg
tacgcggaggcgtgcggtcgctgcgaccgctgcaccggtgacgccccgccggccgaggtc
tcggcggcggcgctcaccgccgccgaggcgtacctggggcaggccggggttgcggtagcg
ccccggaagatgtggccgaccggccttccggccgccggggtgccgctgcgcggcaagatc
ccagcgcaggagcaggccgagaccggtcgggtggtgggccggctctccgacctcggctgg
ggcggtccgctgcgggagctgttggccgacggtgccccggaccagcccgcccccgcgcag
ctgctggcggcggtggtggaggttctgaaagcatgggcgcacggcgacgaccggtggccg
cagcggccggtggcggtggtcgcgctcggttcgcagcagcggcccaagctggtgcagagc
gtagccgggcacgtcgcggaggtgggccggttgccgttgctcggcaccgtgccaccaggc
gggtcgggcggcggccgcgccaacagcgcccaacgggtacgagcactgcacggctcgttc
atcgtgccgccggcggtggcgggcgcgttcgccgagcacccgggcccggtgttgcttgtg
gacgactacatcgactcgggctggaccatggcgctggtcgcgcgggagctgcgcgccgcc
ggcgccaccgcggtgttgccgctggcgctcgccgtcactggctga
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