Natronosporangium hydrolyticum: JQS43_03410
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Entry
JQS43_03410 CDS
T07914
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nhy
Natronosporangium hydrolyticum
Pathway
nhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQS43_03410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhy03019
]
JQS43_03410
03009 Ribosome biogenesis [BR:
nhy03009
]
JQS43_03410
Enzymes [BR:
nhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JQS43_03410
Messenger RNA biogenesis [BR:
nhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JQS43_03410
Ribosome biogenesis [BR:
nhy03009
]
Prokaryotic type
rRNA helicases
JQS43_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
DUF6820
Motif
Other DBs
NCBI-ProteinID:
QSB15421
UniProt:
A0A895YD18
LinkDB
All DBs
Position
752787..754508
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AA seq
573 aa
AA seq
DB search
MTSVSPHADRAGFAELPLRPELLQALSSLGYEEPTPIQREAIPPLLAGHDLLGQAATGTG
KTAAFALPTLELMTPDPARVEPQTLVLVPTRELAVQVSQAFHRYGRDLGVRVLPIYGGQP
IGRQLRSLELGVDVVIATPGRALDHLRRGTLQLSAIRTVVLDEADEMLDMGFAEDIEAIL
EETPTERQTVLFSATMPARINGIAQRHLREPVRIEMGRAATSTGEAPRVRQSAYLVARAH
KPAALGRVLDVAAPAAAIVFCRTREEVDQLTETLNGRGYRAEALHGGMGQEHRDRVMARL
RNGSAELIIATDVAARGIDVEQLTHVVNYNLPSAPEAYVHRIGRVGRAGREGAAITLVEP
REHRMLKAIERVTGQRVVVEKVPTVADLRARRLELTRGALSEILLADDGEELAHFRVVVE
TLADEYDLMEVALAAVKLAHESVAGEPDEQEIPEIAEVGAGRRGTRRAGERDSRSEGGDR
ARPGTGVARLFFNLGRRAGVRPQDLVGAIAGESRLSGRDIGAIEIMDRFSLVEVPADAAD
EVISALRRSTIKGKRATVRREREAARRRPSNKD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgtgagcccgcacgctgaccgggcgggcttcgccgagctgccgctgcgcccg
gagctgctgcaggcgctgagcagcctgggatatgaagagcccaccccgatccaacgagag
gcgattccgccgctgctggccgggcatgacctgctcgggcaggctgccaccggcaccggc
aagaccgccgctttcgccctgccgacgctggagctgatgacgcccgacccggcccgggtc
gagccgcagacgctggtgctggtgccgacccgggagctggcggtccaggtctcccaggcc
ttccaccggtacggccgggacctgggtgtccgggtgctgccgatctacggggggcagccg
atcggccggcagctacggagccttgaactcggtgtggatgtggtcatcgccacaccaggt
cgggcgctggaccatctgcgccgcggcactctgcagctgtcggcgatccgcaccgtggtg
ctcgacgaggccgacgagatgctcgacatgggcttcgccgaggacatcgaggcgatcctg
gaggagacgccgaccgagcggcagactgtgctcttctccgccaccatgccggctcgcatc
aacgggatcgcgcaacggcacctgcgcgagccggtgcggatcgagatggggcgggcggcg
accagcacgggcgaggcgccgcgggtgcggcagagcgcctacctggtggcccgggcgcac
aagccggctgccctcgggcgggtcctggatgtcgccgccccggccgcggcgatcgtcttc
tgccggacccgggaagaggtcgaccagctcaccgagaccctcaacgggcggggttaccgg
gccgaggcgctgcacggcggcatgggtcaggagcaccgggaccgggtgatggccaggttg
cgcaacggcagcgccgagctgatcatcgccaccgatgtggcggcccgcgggatcgacgtg
gagcagctcacccacgtggtcaactacaacctgccgtcggcgccggaggcgtacgtgcac
cggatcggccgggtggggcgagccggccgggagggtgctgcgatcacgctggtggagccg
cgcgaacaccggatgctcaaggcgatcgagcgggtgaccggccagcgggtggtcgtggag
aaggtcccgaccgtcgccgatctacgggcccggcggttggagttgacccggggcgcgctc
tccgagatcctgctcgccgacgacggggaggagttggcccacttccgggtggtggtcgag
acgctcgccgacgagtacgacctgatggaggtggcgctggccgccgtgaagctggcgcac
gaatcggtggcgggcgaacccgacgagcaggagatcccggagatcgccgaggtcggtgcc
ggccggcgcgggacccggcgggcgggtgagcgtgactcgcggtccgagggcggcgaccgg
gctcggccgggcacgggtgtggcgcggctcttcttcaacctgggacggcgcgccggggtg
cggccacaggatctcgtcggggccatcgccggagagtcacggctctccggccgggacatc
ggggcgatagagatcatggaccggttctcgctggtcgaggtcccggcggacgccgccgat
gaggtgatcagtgccctgcgccgaagcaccatcaagggcaagcgagccaccgtgcggcgg
gagcgggaggctgcccgacggcgaccgtcgaacaaggactaa
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