Natronosporangium hydrolyticum: JQS43_03920
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Entry
JQS43_03920 CDS
T07914
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nhy
Natronosporangium hydrolyticum
Pathway
nhy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JQS43_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhy03021
]
JQS43_03920
03400 DNA repair and recombination proteins [BR:
nhy03400
]
JQS43_03920
Enzymes [BR:
nhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JQS43_03920
Transcription machinery [BR:
nhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JQS43_03920
DNA repair and recombination proteins [BR:
nhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JQS43_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QSB15507
UniProt:
A0A895YCI7
LinkDB
All DBs
Position
863888..867775
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNFFDELRIGLATADSIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAAVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVITGVDTEARHRDISTLENEVAAEKRQAENARDAEVEKRAAKLESD
LAELEAEGAKADVRRKVKESGDREMRQIRDKAQREIDRLEEVLDTFRKLEPKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLERLDLDAEADELREVIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKGMAIELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAESQAEARILMLSSNNILKPADGKPVTMPTQDMIIGLYHLTHARPGTAGEGR
SFSSDGEARMAYDSGELHLQAPITLRLRGITELDLGNGKWSAPEGWEPGEPLIVETTLGR
VIFNETLPEGYRFINYEVRKKQLSAIVNDLAERYPKVALAASLDALKEAGFHWATWSGLT
IGMGDVIAPPGKTAILERYEKEAERIDKQYQRGLMTAEERRGELIEIWTRATNEVAQELE
TALPQENPLWKMIHSGARGNLLQLRQISAIRGLVANPRGEIIPRPIKSSYREGLTVLEYF
ISSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTDRSIPMPVGQRDAADAP
VVVHEYAETGAHGRTIAQDALDADGNVVVPRGTDINTIVVQQLVDAGIADVRVRSVLTCE
SKLGICAKCYGRSLPTGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFQIGGVAGEDITQGL
PRVQEIFEARVPKGKAPIAETPGRVRIEDGDRMRKIIIVPDDGSDEIVHDKIPKRVRLRY
QDGEHVQVGEKLTEGTIDPHELLRVMGPRAVQVHLTNEVQEVYRSQGVLIHDKHIEIIIR
QMLKRVQVIDSGATEFLPGVLVDRAIFEAENRRLVSEGGEPAAGRPVLMGITKASLATES
WLSAASFQETTRVLTDAAINARSDSLIGLKENVIIGKLIPAGTGINRYRNIRVEPTEEAK
SKVYSMTSYPETDYGFGPAGGQAVPLDDFGFGSYG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgttaacttcttcgatgagctccggatcgggttggcgacagccgacagcatc
cggcagtggtcgcacggtgaggtaaagaagcccgagacgatcaactaccggacgctcaag
cccgaaaaggacggcttgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggtaaatacaagcgggtccggttcaagggcatcatctgcgagcgctgcggcgtg
gaggtgacccgcgccaaggtgcggcgggagcggatgggccacatcgagctggcggccgcg
gtcacccacatctggtatttcaagggtgtcccgagccggctcggctacctgctggacctg
gcgccgaaggatctcgagaagatcatctacttcgcctcgtacgtgatcaccggggtggac
accgaggctcggcaccgtgacatctccaccctcgaaaacgaggtagccgcggagaagcgg
caggctgagaacgcgcgcgacgccgaggtggagaagcgcgccgccaagctggagtcggac
ctggccgagctcgaggctgagggcgccaaggccgacgtacgccggaaggtcaaggagtcc
ggcgaccgggagatgcggcagatccgggacaaggcgcagcgggagatcgaccggctggag
gaggtgctcgacaccttccgcaagctggagccgaagcagttggtcaccgacgagctgctc
taccgggagctgcgcgaccggttcggcgagtacttcaccggcggcatgggcgctgaggcg
atcaaggcgctgctggagcggctggacctcgacgctgaggccgatgagctgcgggaggtg
atccgctccgggaagggccagcggaagatccgggcgctgaagcggctgaaggtggtcgcg
gcgttcctgaacacccgcaactctccgctggggatggtgctggactgcgtgccggtgatc
ccgccggagctgcggccgatggtgcagctcgacggtggccggttcgccaccagcgacctc
aacgacctctaccgtcgggtgatcaaccggaacaaccggttgaagcggttgatggacctc
ggggcgcccgagatcattgtcaacaacgagaagcggatgctgcaggaggcggtcgacgcg
ctcttcgacaacggccgccgcggccggccggtcaccggacctggtaaccggccgttgaag
tcgctctccgacatgctcaagggtaagcagggccggttccggcagaacctgctcggcaag
cgggtcgactactccggtcgttcggtgatcgtggtcggtccgcagctgaagctgcaccag
tgcgggctgcccaaggggatggcgatcgagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcccagaacatcaagtccgccaagcggatggtggagcggcagcgg
ccggtcgtctgggacgtgctggaagaggtcatcggggaacacccggtgctgctcaaccgc
gcacccaccctgcaccggctggggatccaggcgttcgaaccgcagctggtcgagggtaag
gcgatccagatccacccgctggtctgtaccgcgttcaacgccgacttcgacggcgaccag
atggcggtgcacgtgccgctgtcggccgagtcgcaggccgaggcgcggattctgatgctc
tccagcaacaacatcctcaagccggccgacggcaagccggtgaccatgcccacccaggac
atgatcatcgggctgtaccacctcacccacgcccgtccgggcaccgcgggcgagggccgg
tcgttcagctccgacggtgaggcccggatggcctacgactcgggtgaactccacctgcag
gcgccgattacgctgcggctgcgggggattaccgagctggacctggggaacggcaagtgg
tccgcgcccgagggctgggagcccggtgagccgctgatcgtggagaccaccctggggcgg
gtgatcttcaacgagacgctgcccgagggttaccgcttcatcaactacgaggtacgcaag
aagcagctctcggcgatcgtcaacgacctcgccgagcggtacccgaaggtggcgctcgcc
gcctcgctggacgcgctaaaggaggccggtttccactgggccacctggtccgggctgacc
atcggcatgggcgacgtcatcgcgccgcccggcaagaccgccatcctggagcggtacgag
aaggaagccgagcggatcgacaagcagtaccagcggggtctgatgaccgccgaggagcgc
cgcggcgagctgatcgagatctggacccgggcgaccaacgaggtggcccaggagctggag
accgcgctaccccaggagaacccactgtggaagatgatccactctggggcccggggtaac
ctgctgcagctgcggcagatctccgcgatccgcgggttggtcgccaacccgcggggtgag
atcatcccgcgtccgatcaagtcctcctaccgggaggggctgaccgtgctggagtacttc
atctccagccacggtgcccggaagggtctggcggacaccgcactgcggaccgccgactcc
ggttacctcacccggcggctggtcgacgtctcccaagacgtcatcgtccgcgaggaggac
tgcggcaccgaccggtcgatcccgatgccggtggggcagcgggacgccgccgatgcaccg
gtggtggtgcacgagtacgccgagaccggcgcgcacgggcggaccatcgcccaggacgcg
ctggacgccgacggcaacgtggtggtgccgcgtggcaccgacatcaacaccattgtggtc
cagcaactggtcgacgcggggatcgcggatgtccgggttcgcagcgtgctgacctgcgag
tcgaagctcgggatctgcgccaagtgctacggccggtcgttgccgaccggcaagctggtc
gacgtcggcgaggcggtaggcatcatcgccgcccagtcgatcggtgagccgggcacgcag
ctgacgatgcggaccttccagatcggtggcgtcgcgggtgaggacatcacccagggtctg
cctcgggtccaggagatcttcgaggcgcgggtgccgaagggcaaggcgccgatcgcggag
actccgggccgggtgcggatcgaggacggcgaccggatgcggaagatcatcatcgtgccg
gacgacggcagcgatgagatcgtccacgacaagatcccgaagcgggttcggctgcgttac
caggacggtgagcacgttcaggtcggcgagaagctgaccgagggcaccatcgacccgcac
gagctgctgcgggtgatggggccgcgggcggtccaggtccacctcaccaacgaggtgcag
gaggtctaccgctcgcagggtgtgctgatccacgacaagcacatcgagatcatcatccgg
cagatgctgaagcgggtgcaggtgatcgactccggcgccaccgagttcttgccgggtgtg
ctggtcgatcgggcgatcttcgaggcggagaaccggcggctggtctccgagggcggcgag
cccgcggctggccggccggtgctgatggggatcaccaaggcgtcgctcgccaccgagtcg
tggctctcggcggcctccttccaggagaccacccgggtgctgacggacgcagcgatcaat
gcccgcagcgactcgttgatcggcttgaaggagaacgtcatcatcgggaagctcatcccg
gccggcaccggcatcaaccggtaccgcaacatccgggtggagccgaccgaggaggccaag
tcgaaggtctactcgatgaccagctacccggagacggattacggcttcggcccggccggt
ggccaggcggtgccgttggacgacttcggattcggctcctacggctga
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