Natronosporangium hydrolyticum: JQS43_05765
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Entry
JQS43_05765 CDS
T07914
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nhy
Natronosporangium hydrolyticum
Pathway
nhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQS43_05765 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhy03021
]
JQS43_05765 (rho)
03019 Messenger RNA biogenesis [BR:
nhy03019
]
JQS43_05765 (rho)
Transcription machinery [BR:
nhy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JQS43_05765 (rho)
Messenger RNA biogenesis [BR:
nhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JQS43_05765 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
SAP
NACHT
Motif
Other DBs
NCBI-ProteinID:
QSB15841
UniProt:
A0A895YE30
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All DBs
Position
1257985..1259889
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AA seq
634 aa
AA seq
DB search
MSDTTDVTPEVATRATDAPSRRRGGTGLSAMLLPELQSLAGSLGITGTGRMRKNDLIAAI
QERQAGGASGGRAAGRSRAAAAEEPREQVRAEVPAAEGAAGRSETSGDAPARGSRRSSRN
ESGGARRETAGERNEAGGSRADESASRNENRSESRNESRNESGAGNDGGGDQSREGADAG
SRSSRNEGRDNNRRGGNDERRGGNDERRGSNDERRGGDDDDGDGGGRRGRRNRYRDRRRG
RSERTGGGGESEPQVADDDVLVPVAGILDVLDNYAFVRTNGYLPGPKDVYVSMAQVRKHG
LRRGDAVTGVVRAPRDTENRRDKYNPLVRLDTINGMDPEEARRRPEFYKLTPLYPQQRLR
LETEPHLLTNRVIDLVMPIGKGQRALIVSPPKAGKTTVLQSVANSITANNPECHLMVVLV
DERPEEVTDMQRSVKGEVIASTFDRPPSDHTTVAELAIERAKRLVELGMDVVVMLDSITR
LGRAYNNATPASGRIMSGGIDSTALYPPKRFLGAARNIENGGSLTIFATALVETGSVMDT
VIFEEFKATGNAELKLDRKIADKRVFPAIDIDQSGTRKEEILLAPDELAITYKLRKVLHS
LESQAALDLLLSKLKENKTNIEFLMQISKTTPGE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgccggaggttgcgaccagggcaaccgacgcccccagt
cgccggcgcggcggcaccgggctgtccgcgatgctgcttcctgagttgcagagcctcgcg
ggttcgctgggcatcaccggcaccggccggatgcggaagaacgacctgatcgcggcgatc
caggagcgacaggcgggcggcgccagcggcggccgggcggctggccggagccgtgcggcg
gctgcggaagagcctcgggagcaggtgcgggctgaggtgccggcggccgagggcgcggct
ggccggtctgagaccagtggggacgcgccggcgcgcgggtctcgccggagttctcggaac
gagtctggcggtgcccgccgggagaccgccggggagcgcaacgaggccgggggttcccgc
gccgacgaaagcgcttcccggaatgagaaccggagcgagagccgcaacgagagccgcaac
gagagcggtgcgggcaatgacgggggcggtgaccagtcgcgcgagggcgccgacgccggc
tcccggagttcccgcaacgaaggccgcgacaacaaccggcggggcggcaacgacgagcgc
cggggcggcaatgacgagcgccggggcagtaatgacgagcgccgcggcggcgatgatgac
gacggggacggcggtggccggcgcggtcggcgcaaccggtatcgggaccggcggcgcggc
cgcagcgagcggaccggcggtggcggcgagagcgagccccaggtagccgacgacgatgtc
ctggtgccggtggccggcatcctggatgtgctcgacaactacgcgttcgtccggaccaat
ggctaccttccgggccccaaggacgtctacgtctccatggcacaggtgcgcaagcacgga
ctgcgccgtggcgatgcggtcaccggcgtggtgcgggcgccccgggacaccgagaaccgg
cgggacaagtacaacccgctggtccggctggacacgatcaacgggatggacccggaggag
gcccgccgccggccggagttctacaagctcactccgctctacccgcagcagcggctgcgg
ctggagaccgagccgcacctgctgaccaaccgggtcatcgacctggtgatgccgatcggc
aaggggcagcgcgcgctgatcgtctcgccgccgaaggcgggtaagaccacggtgctgcag
tcggtggcgaattcgatcaccgccaacaacccggagtgccatctgatggtggtgctcgtc
gatgagcggcctgaagaggtcaccgacatgcagcgttcggtgaagggtgaggttatcgcc
tcgaccttcgaccggccgccgtcggaccacaccaccgtggccgagctggcgatcgaacgg
gccaagcgcctggtcgagctggggatggacgtggtggtgatgctggactcgatcacccgg
ctggggcgggcgtacaacaacgccaccccggcgagcgggcggatcatgtccggcgggatc
gactcgaccgcgttgtacccgccgaagcggttcctcggcgccgcccggaacatcgagaac
ggcggatcgctgaccatcttcgcgaccgcgctggtggagaccggctcggtgatggacacg
gtgatcttcgaggagttcaaggcgaccggcaacgccgagctcaagctcgaccggaagatc
gctgacaagcgggtcttcccggcgatcgacatcgaccagtcgggcacccgcaaggaggag
atcctgctcgcgccagacgagctggcgatcacgtacaagctgcgtaaggttctgcactcg
ctggagtcgcaggcggcgttggatctgctgttgagcaagctcaaagaaaacaagaccaac
atcgagttcttgatgcagatctcgaagaccacgcccggcgaataa
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