Natronosporangium hydrolyticum: JQS43_09645
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Entry
JQS43_09645 CDS
T07914
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nhy
Natronosporangium hydrolyticum
Pathway
nhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JQS43_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhy03400
]
JQS43_09645
Enzymes [BR:
nhy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JQS43_09645
DNA repair and recombination proteins [BR:
nhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JQS43_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
UvrD_C
HHH
NPHP3_N
nSTAND3
PhoH
DUF87
AAA_16
AAA
DEAD
Motif
Other DBs
NCBI-ProteinID:
QSB17221
UniProt:
A0A895YI40
LinkDB
All DBs
Position
complement(2172384..2174618)
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AA seq
744 aa
AA seq
DB search
MPPPASSETRPRGAVLEAVLERITYANDETGYTVARVATGRSGDDLLTVVGSLLGVQPGE
SLKLVGRWSSHPRYGKQFEVHSYTTVLPATVQGIERYLGSGLIKGIGPKTAARIVATFGA
DTLRVIEEEPARLREVHGLGNKRTAAIGAAWLEQQAIKEVMLFLQGVGVSTSLAVRIYKQ
YGDGSISVVRNEPYRLASDVWGIGFKTADTIAQAVGIPHDSPQRIRAGLRYTLSEAADNG
HCFLPEPNLVADAAEILALAAELVRPQLAALADEDGVVREAVPNPSDEHGTIPAAYLVPF
HRAEQALANGFRRLLHSRDDRLPHFATVDWEKVFRWLQLRTGAELAAGQRAAVRLALTEK
VAVLTGGPGCGKSFTVRSIIEVAAAKRAKIVLAAPTGRAAKRLTELTGHPAATVHRLLEL
RPGGDAARDADNPLDADLVVVDEASMLDLLLANKLTKAVPAGAHLLLVGDVDQLPSVGAG
EVLRDLLAAEPIPRVRLTEIFRQAQESGVVINAHRINHGQSPEFGAHPDFFLFPSDEPEA
TAEQVVDIVANRIPRRFRIHAREVQVLAPMHRGVCGAGALNTALQQALSPPREGQPERRH
GARVFRAGDKVIQLRNNYEKGAAGVFNGTVGVVTTVDLDDQRLLVRTDEDEEIGYDFDEL
DELAHAYAITVHRSQGSEYPAVVIPVTTSAYPMLQRNLLYTAVTRAKRLVVLAGARKAIA
IAVRTAGAGRRYTALTHRLADPAG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
attccgccccccgcgtccagcgaaacgcggccgcggggggcggtgctggaggcggtgctg
gagcggatcacctacgccaacgacgagacgggttacacggtcgcccgggtggcgaccggc
cgctccggcgacgacctgctgacggtggtgggttcgctgctcggggtgcagcccggggag
agcctgaagctggtcggccggtggagttcccaccctcgctacggcaagcagttcgaggtc
cactcgtacaccactgtgctgccggcgaccgtgcagggcatcgagcgttacctcggctcc
gggctgatcaaggggatcggaccgaagaccgccgcccggatcgtcgccaccttcggcgcg
gacacgctgcgggtgatcgaagaggagcccgcgcggctgcgcgaggtgcacgggctgggc
aacaaacggaccgctgcgatcggcgccgcctggctcgaacagcaggcgatcaaggaggtg
atgctcttcctgcagggggtcggcgtgtccacgtcgctggcggtgcggatctacaagcag
tacggcgacgggtcgatctcggtggtccgcaacgaaccttaccgactcgccagcgacgtg
tggggcatcggattcaagaccgccgacactatcgcccaggcggtgggcatcccccacgac
agcccgcaacggatccgcgccgggctccgctacaccctctcggaggcggccgacaacggc
cactgcttcctgccggaaccgaacctggtcgccgacgccgccgagatcctcgcgctcgcg
gccgagctggtccgcccgcagctggcggccctcgccgacgaggacggggtggtccgggag
gcggtgccgaaccccagcgatgagcacgggaccatcccggcggcctatctggtgccgttc
caccgggccgagcaggcgttggcgaacgggttccggcggctgctgcacagccgcgacgac
cggctgccccacttcgccacggtcgactgggagaaggtcttccgctggctgcagctgcgc
accggcgccgaactcgccgccggtcaacgggcggcggtgcggctcgcgctgaccgagaag
gtggcggtgctcaccggcgggcccggctgcggcaagtccttcacggtccggtcgatcatc
gaggtggcggcggcgaagcgggcgaagatcgtgctggccgccccgaccggccgggccgcg
aaacgactcaccgagctgaccggtcacccggccgccaccgtccatcggctgttggagctg
cgacccggcggtgacgccgcccgcgacgccgacaacccgctcgacgcggatctggtggtg
gtcgacgaggcgtccatgctggatctgttgctggcgaacaagctcacgaaggcggttccc
gccggagcccacctgctgctggtgggcgacgtggatcagctcccctcggtgggcgccggg
gaggtgctgcgggacctactcgccgccgaaccgatcccccgggtccggttgaccgagatc
ttccggcaggcccaggagtcgggggtggtgatcaacgcccaccggatcaaccacgggcag
tcccccgagttcggcgcccacccggacttcttcctcttccccagcgacgagcccgaagcc
accgccgagcaggtggtggacatcgtggcgaaccggatcccccgccggttccgcatccac
gcccgggaggtgcaggtcctcgcccccatgcaccggggagtctgcggcgccggcgcgctc
aacaccgcgctgcagcaggcgctgtcaccaccccgcgagggccagccggagcggcgccac
ggcgcccgggtcttccgcgccggcgacaaggtgatccagctccgcaacaactacgagaag
ggcgcagccggggtcttcaacggcaccgtcggcgtggttaccaccgtcgacctcgacgac
cagcgcctgctcgtccgcaccgacgaggatgaggagatcggctacgacttcgatgagctg
gatgagcttgcccacgcgtacgcgatcacggtgcaccggtcgcagggcagcgaataccct
gcggtggtcatcccggtgaccaccagcgcgtacccgatgttgcagcggaacctgctctac
accgcggtgacccgggccaagcggctggtggtgttggccggcgcgcgcaaggcgatcgcg
atcgcggtgcgcaccgccggggccggccgccgctacaccgcgcttacccatcggctggcc
gaccccgccgggtaa
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