Natronosporangium hydrolyticum: JQS43_17870
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Entry
JQS43_17870 CDS
T07914
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nhy
Natronosporangium hydrolyticum
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nhy03009
]
JQS43_17870 (rimO)
Enzymes [BR:
nhy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JQS43_17870 (rimO)
Ribosome biogenesis [BR:
nhy03009
]
Prokaryotic type
ribosomal protein modification factors
JQS43_17870 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
QSB13458
UniProt:
A0A895YI78
LinkDB
All DBs
Position
complement(3995714..3997204)
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AA seq
496 aa
AA seq
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MSEATSSPGHDRRVALVTLGCARNEVDSEELAGRLASEGWRVTTDSDDADVVLVNTCGFV
AQAKQDSVDTLLAAADGGAAVVAAGCLAERYGEQLAGALPEAAAVLSFDDYPDISDRLSA
VLAGEQLPAHAPRDRRKLLPLTPADRAEARTGVRLPGHAQPGSSEPDQATPAHLRPVLRR
RLDRSPVAPLKLASGCDRRCTFCAIPQFRGAFVSRPPEELLAEAEWLADSGVRELLLVSE
NSTSYGKDLGDPRLLEQLLPQLAAVTGIARVRVSYLQPAEMRPSLVEAIATTPGVAPYFD
LSFQHASEPVLRRMRRFGSTERFLSLLQEVRRLAPEAGARSNVIVGFPGETRPDVAELAR
FLEAASLDAIGVFRYSDEDGTEAAELPGKVSDAAIARRYDRLLALAEELCAQRAAERVGS
TVEVLVDSVEEGVVEGRAAHQAPEVDGCTTLVGQVAGLVPGDLVTAKVCDSDGVDLVAEP
LQSAPVAAEDRQTAGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagctacctcgtcacccggccacgatcggcgagtcgcgctggtgacgctcggc
tgtgcccgcaacgaggtggactccgaggagttggccggccggctcgccagcgaaggctgg
cgggtcaccaccgacagcgacgacgcggatgtggtcctcgtcaacacctgcggcttcgtc
gcccaggccaagcaggattcggtcgatacgctgctggccgccgccgacggcggggccgcg
gtggtggcggccgggtgcctggccgagcggtacggtgagcagctcgccggcgctctgccg
gaggcggcggcggtgctcagcttcgacgactatccggacatctccgaccgactctcggcg
gtgctggcgggtgagcagctgcctgcccacgctccccgggaccgccgtaagttgttgccg
ctgacccccgccgaccgggcggaggcccggaccggggtgcgactgcccggccatgcccaa
cccggttcgtccgagccggatcaggccaccccggcgcatctgcggccggtgttgcggcgc
cggctggaccgtagcccggtggcgccgctgaaactggccagtggctgcgaccggcggtgc
accttctgtgcgattccgcagttccggggggcgttcgtctcccggccgccggaggagctg
ctcgccgaggcggagtggctcgccgactccggcgtccgggagttgctgttggtcagcgag
aactccacctcctacggcaaggatctgggcgacccgcggctgctggagcagctgttgccg
cagttggcggcggtgaccggcatcgcccgggtgcgggtcagctacctgcagccggccgag
atgcgcccgagcctggtcgaggcgatcgcgaccaccccgggggtggctccttacttcgat
ctgtcgttccagcacgccagcgagccggtgctgcgccggatgcgccggttcggctccacc
gaacgcttcctcagcctgttgcaggaggtccggaggttggctccggaggccggtgcccgc
agcaacgtgatcgtgggcttccccggcgagacccgaccggacgtagcggagttggcgcgg
ttcctggaggcggcgagcctggacgcgatcggggtcttccggtatagcgacgaggatggc
accgaggcggcggagttgcccgggaaggtgagcgacgccgccatcgcccgtcgctatgac
cggttgctggcgctcgccgaggagttgtgcgcgcagcgggccgccgagcgggtgggcagc
accgtggaggtgctggtcgacagcgtcgaggagggcgtcgtggagggccgggcggcgcac
caggcgccggaggtcgatggctgcaccaccctggtcggccaggtggccgggctggtcccg
ggcgacctggtcacggcgaaggtgtgcgacagcgatggggtggacctggtggcggagccg
ttgcagtcggcgccggtcgcggccgaggaccggcagaccgcgggtcggtga
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