Natronosporangium hydrolyticum: JQS43_22850
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Entry
JQS43_22850 CDS
T07914
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nhy
Natronosporangium hydrolyticum
Brite
KEGG Orthology (KO) [BR:
nhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhy03032
]
JQS43_22850 (topA)
03400 DNA repair and recombination proteins [BR:
nhy03400
]
JQS43_22850 (topA)
Enzymes [BR:
nhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JQS43_22850 (topA)
DNA replication proteins [BR:
nhy03032
]
Prokaryotic type
DNA Topoisomerases
JQS43_22850 (topA)
DNA repair and recombination proteins [BR:
nhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JQS43_22850 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QSB14308
UniProt:
A0A895YKE7
LinkDB
All DBs
Position
complement(5076037..5078985)
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AA seq
982 aa
AA seq
DB search
MSDSTRDRRRAVPSTATDKRTRLVVVESPAKARTISGYLGPGWVVEASLGHIRDLPAGAK
QMPEKFKKEPWAYLGVNVDHDFEPVYIINPDRSKHVTKLRALLKEADELYLATDEDREGE
AIAWHLVEALKPKVPIRRMVFHEITKPAIQAAIANPRDINRDLVDAQETRRILDRLYGYD
VSAVLWKKVQRGLSAGRVQSVATRVVVDRERARMAFRSAEYWDIAATLAVVPDSVGEGPR
TFGATLIALDGDRIATGKDFEPTTGAVKPGSGVVHLDGDGARGLAARLADRPFAVTRVET
KPYRRRPYPPFITSTLQQEAARKLRMSSAVTMRVAQRLYENGYITYMRTDSVNLSDTAIA
AARTQVAELFGDRFVPPQPRRYTGKVKNAQEAHEAIRPAGDAFRTPGDIAEEVSAEELRL
YELIWRRTIASQMTDAVGQSVSVRIRAVSNAGEECDFAATGKTIIDPGFLKAYVESSDDA
DAEAEDAERRLPNLAKDQPLTAEELQAVGHTTAPPARYTEASLVKALEERGIGRPSTYAS
IMQTIQDRGYVFKRGQALIPSFTAFAVVGLMERHYPRLVDYDFTAAMEDELDGIAAGEAA
RIDFLRAFYFGAGDDLGGEGSIARAGGLKRLVTEQLGEIDARSVNSIPLFTDEDGRTVVV
RVGRYGPYLQRFRAEEETAPAAGGGEGDGGGESDGDRDRAPIPDGVAPDELTPEKVAELF
LGGGGERKLGEHPDTGEPIVLKSGRYGPYVSHGEKNASLLRSHSPEQLTLADALKVLSLP
RVVGTDEAGEEILVASGRYGPYLKRGSDTRSLENEEQLFTLTVAEALALLAAPKTRGRRA
PAPPLKELGADPLTEKAVVIKDGRFGPYVTDGETNASLRRGMTVEGMTLEQASQMLMERR
AAGPAPKKAGKKAAPKKTTAKKTTAKKAAESTAKQATAKKAAPKKATAKQAAAKKTTAKK
TTAKKSTTAQASAEQAAGASDT
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccacccgagaccgcaggagagctgtgccgagcaccgccaccgataagcgc
accagactggtcgtcgtcgaatcgccggcgaaggctaggacgatctctggctacctgggg
ccagggtgggtggtagaggccagcctcggtcatatccgcgacctgccggccggcgccaag
cagatgccggagaagttcaagaaagaaccctgggcctacctcggggtgaacgtcgaccat
gacttcgagcccgtttacatcatcaacccggaccgctcgaaacacgtcaccaaactgcgt
gcactgctgaaagaggccgacgaactctacctcgccaccgatgaggaccgcgaaggtgag
gcgatcgcctggcatctggtggaggcgctcaagcccaaggtgccgatccggcggatggtc
ttccacgagatcactaagccggcgatccaggccgcgatcgccaacccgcgcgacatcaac
cgggacctggtcgacgcccaggagacccggcggatcctggaccggctctacggttacgac
gtctcggcggtgctctggaagaaggtgcagcgggggctgtcggccggccgggtgcagtcg
gtggcgacccgggtcgtggtggatcgggaacgcgcccggatggcgttccggtcggcggag
tactgggacatcgccgccactttggcggtggtgcccgactcggttggggaaggaccgcgc
accttcggggcgaccctgatcgcgctggatggcgaccggatcgccaccggcaaggacttc
gagccgaccaccggtgcggtcaaacccggctccggggtggtccacctggatggggacggg
gcgcgagggctcgcggcgcggttggccgaccggccgttcgccgtcacccgggtcgagacg
aagccgtaccggcgccggccgtacccgccgttcatcacctcgacgctgcagcaggaggcc
gcccgtaagctgcggatgtcctcggcggtgacgatgcgggtggcgcagcggctgtacgag
aacggctacatcacctacatgcggaccgactcggtcaacctctccgacaccgccatcgcg
gccgcccgtacccaggtggcggagctgttcggcgaccggttcgtgccgccgcagccgcgc
cgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcgatccggccggccggt
gacgcgttccgcacccccggcgacatcgccgaggaggtctccgccgaggagctccggctc
tacgagctgatctggcgccggaccatcgcgtcccagatgaccgatgcggtcggccagtcg
gtctcggtgcggatccgggcggtgtcgaacgctggcgaggagtgcgacttcgccgccacc
ggcaagaccatcatcgacccgggcttcctcaaggcgtatgtggagtccagcgacgacgcc
gatgccgaggctgaggacgccgaacgccgactgcccaacctggccaaagaccaaccgctg
accgcggaggagctgcaagcggtcgggcacaccaccgcgccgcccgcccggtataccgag
gcgagcttggtgaaagcgctggaggagcgggggatcggccgaccgtccacgtacgcgtcg
atcatgcaaacgattcaggaccgcggctacgtctttaagcgcggtcaggcgctgatcccc
tcgttcaccgcgttcgcggtggtcgggctgatggagcgccactatccgcggctggtcgac
tacgacttcaccgcggcgatggaggacgagctcgacgggatcgccgccggggaggccgca
cggatcgacttcctgcgggcgttctacttcggcgccggtgacgatctcggcggcgagggc
tcgatcgcccgggcgggcgggctgaagcggctggtgaccgagcagctcggtgagatcgac
gcccggtcggtgaactcgatcccgctcttcaccgacgaagacggccgtaccgtcgtggtt
cgggtcggccggtacggcccgtacctgcagcggttccgggcggaggaggagacggcgccg
gcggccggcggtggcgagggcgacggcggcggcgagagcgacggggatcgggaccgggcg
ccgatcccggacggggtggcgcccgacgagctgaccccggagaaggtcgcggagctgttc
ctcggcggcggcggcgagcgcaagctgggcgaacatcccgacaccggggagccgatcgtg
ctcaagtcggggcggtacgggccgtacgtgtcgcacggcgaaaaaaacgcctcgctgcta
cgttcgcacagcccggagcagctcacgctggcggacgcgctcaaggtgttgagcttgccg
cgggtggtcggcaccgatgaggctggtgaggagatcctggtcgcctccgggcggtatggg
ccctatctgaaacggggcagcgacaccaggtcgttggagaacgaagagcagctgttcacg
ttgacggtggcggaggcgctggcgctgctcgcggcgccgaagacccgcggtcgccgggcg
ccggcgccgccgttgaaggagctgggagccgacccgctcaccgagaaggctgtggtgatc
aaggacggtcggttcggcccgtacgtgaccgatggtgagacgaacgcctcgctgcgccgc
gggatgacggtagagggcatgaccctggagcaggcgtcccagatgttgatggagcggcgg
gcggcgggtccggctccgaagaaggcgggcaagaaggccgcgccgaagaagaccacggcg
aagaagaccaccgccaagaaggcggcggagagcactgcgaagcaggccacggcgaagaag
gccgcgccgaagaaagccacggcgaagcaggcggcggccaagaagaccaccgcgaagaag
accaccgcgaagaagtcgaccaccgcgcaggcatccgccgagcaggccgcgggggcttcc
gacacctga
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