Niabella ginsenosidivorans: A8C56_00620
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Entry
A8C56_00620 CDS
T04418
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03420
Nucleotide excision repair
nia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A8C56_00620
03430 Mismatch repair
A8C56_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_00620
Enzymes [BR:
nia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8C56_00620
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8C56_00620
MMR (mismatch excision repair)
Other MMR factors
A8C56_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
ResIII
Patatin
TPR_ESP1
PhoH
PCRF
Death_3
Motif
Other DBs
NCBI-ProteinID:
ANH79675
UniProt:
A0A1A9HX67
LinkDB
All DBs
Position
143381..145735
Genome browser
AA seq
784 aa
AA seq
DB search
MQDYLAGLNERQREAVLHINGPLMIIAGAGSGKTKVLTTRIAHLMATGVDAFNILALTFT
NKAAREMKERVERILGNNEARNLYIGTFHSVFARILRAEAHRIGYPNSFTIYDTDDAKSV
VKTVINEMQLDEKLYKPATVYNRISSAKNALVTPAEYANDYYIQQEDIRGNRPAIAKIYD
AYCKRCFKNGAMDFDDLLLKFYELLKTFPDVLSKYQHKFRYIMIDEYQDTNPAQYEIVKL
LGAMNENVCVVGDDAQSIYSFRGATIQNILQFQKDYDDVKVVKLEQNYRSTQNIIHVANE
VIRNNKAQIPKVLFTENASGEKIKIVRTMTDNDEGKFVADTIQEQKLRNHYANKDFAILY
RTNAQSRAFEESLRRMNIPYTMYGGISFYQRKEIKDFVAYLRLIVNKKDEEALKRIINYP
VRGIGKTTIDKILLQANTHNITMWEMLENADRFGFRAGTLNVIQDFVVMIRSFTSMLEKQ
NAYDVAFHVGKQTNLVKELFNDKSTEGLQRYENIQELLNSIKEWVESPDNEEGEVVDKSL
GAYLQQITLLTDADNKDPDADTVKLMTIHAAKGLEFACVFAAGLEEMLFPNAMSINTREE
LEEERRLFYVVVTRAKKKLWITYANTRYKFGSLVQNEPSRFIDELPADYVDSTYAGGGTK
QSTFGFGSTGSAYERMSGGWSSTGFDAGKKFGPPPAKKTTPEYLSPKPEAKKVADHTPSA
DFQASDVNDIAVGQRVEHQKFGFGEVLKLEGNQHNKMAIIRFDQNGEKKILLNYARLRIL
NSQL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattatttagcaggattgaatgaacggcagcgggaagctgttttacatattaac
gggcctttgatgattattgcgggcgcaggaagcggaaaaaccaaagtgctgaccacccgc
attgcgcacctgatggccacgggagtggatgctttcaacattctggcgcttacgtttacg
aacaaggccgctcgcgagatgaaggaacgcgtagagcgtatcctgggcaataatgaagca
cggaacctgtatattggaaccttccacagtgtttttgcccgtattctccgtgcagaagca
catcgcatcggctatcctaacagttttacgatttatgatacagacgatgccaagagcgtt
gtaaaaacggtgatcaatgaaatgcagctggatgaaaaactgtataaacccgccacggtt
tataaccggatctcttctgcaaaaaatgcattggtaacaccggcagagtatgccaatgat
tattatatacagcaggaagatataagaggcaaccggccggccattgcaaaaatctatgat
gcttattgcaagcgctgctttaagaatggtgccatggattttgacgacctgctgctgaag
ttttatgaactgctgaaaacctttcctgatgtattgagcaagtatcagcataagttcaga
tacatcatgatcgatgagtaccaggataccaacccggcgcaatatgaaattgtaaagctg
ctgggcgccatgaatgagaatgtgtgtgtggtgggcgatgatgcacagagcatttacagc
ttccgcggggccacgatccagaacatccttcagttccagaaagactatgacgacgtaaag
gtggtaaagctggagcagaattaccgcagtacgcaaaacattattcacgtagccaatgag
gtgatccgcaataataaagcacagataccaaaagtgttatttacggaaaatgccagcggc
gaaaagataaagatcgttcgcactatgacggacaatgacgaagggaagtttgttgcggat
accatccaggagcaaaagctgaggaatcattatgccaataaggattttgccattctttac
cgtacgaatgcgcaaagccgtgcatttgaagaatcgctcaggcgtatgaatatcccttat
accatgtatggcggtatcagtttttatcagcgtaaggaaataaaggattttgttgcctat
ttacgtcttatcgttaataaaaaagatgaagaagcgctgaaacggatcattaattatccg
gtgcggggaatcgggaaaacaaccattgataagatattgctccaggccaacacgcacaat
attactatgtgggaaatgctggaaaatgccgaccggttcggattccgtgccggcacgctt
aacgtgatccaggattttgtggttatgatccggagctttaccagtatgctggaaaaacag
aacgcctatgatgttgcttttcatgtgggtaagcaaaccaacctggtaaaagagcttttt
aatgataagagcactgaaggattgcagcgttatgagaatatacaggaattgctgaactct
attaaagaatgggtggaaagcccggataacgaggaaggggaagtggtggataaaagcctg
ggcgcttatctccagcagatcactttactaacggatgcggataataaggaccctgatgcg
gataccgtaaagctgatgaccatacatgcagcaaagggactggaatttgcctgtgtgttt
gcagcagggcttgaagaaatgctgtttccgaatgcaatgagcattaatacccgcgaggag
ctggaagaggaacgccgcctgttttatgtggtggttacaagggccaaaaagaaattgtgg
attacctatgcgaatacacggtataaattcggctcattggtacaaaacgagcccagcagg
tttattgatgaactgcctgcggattatgtagacagtacgtatgccggagggggaaccaaa
caaagcactttcggatttggaagtaccggctctgcttatgaacgcatgagtggcggctgg
agcagtaccggttttgatgccgggaaaaaattcggccctccgccggctaaaaaaacgacg
ccggaatacctgagcccgaaacctgaagcaaaaaaagtggccgatcatacgccttcggcc
gatttccaggccagtgatgtgaacgatattgctgttgggcaaagagtggagcaccagaaa
tttggctttggagaagtgctgaaactggaaggcaaccagcacaacaaaatggccatcatc
cggtttgaccagaatggcgaaaagaaaattcttttaaattatgcacggttaagaatcctg
aactctcagttatag
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