Niabella ginsenosidivorans: A8C56_00955
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Entry
A8C56_00955 CDS
T04418
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nia02000
]
A8C56_00955
Transporters [BR:
nia02000
]
Other transporters
Pores ion channels [TC:
1
]
A8C56_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
CooC_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
ANH79733
UniProt:
A0A1A9HWW8
LinkDB
All DBs
Position
208184..211234
Genome browser
AA seq
1016 aa
AA seq
DB search
MLKTKKTNAFCGRAMLGCFLTLLSFIPPAGFTRNAIPMDFAHQQAPVKGKVTDENKTPLE
GVTVTEKGTQNSTVTRADGTFSLTVSSDTSVLVFSAIGYQTLEVAAAAASEVTLVKQAQT
IDEVVVVGYGSQKKSDLTGSVATISSKNLSEINAPNFVDKIQGRVPGMNINTGNAKPGEV
ASMTVRGENSISASNQPLIILDGVPFNGSFNDISTSSIENVSVLKDASSTAIYGSRAANG
VIIVTTKKGQNGKPRVAYNGYVGVQTVERRLHLMNGPEYIQYMRDYQASKGKTGDELDPE
NYLFANVLEQWKKGEEVNWQDEVFNKAALVQEHQLSISGGSEKSNYYASVGYLNQDGLVK
NTSYERYNVALGLNQTLLPWLKSGLNVQLSQGNTNGVQPSIDNAVKLSPYGKNRDENGNR
VLYPMYAQTLYPNPFADENGLDDNTRRTVFAAGFLDAKLPINGLSFKTSFGTNYRHEFTG
QYYGANTFSGMSMNGYGQIDNSDYFDWTWENLLTYDRSFGDHKLNVVGLYSAQKTNLKTS
SLYGEDFIIDNGYNNLESASKNQKINSNLTNTALISYMGRINYGFKDRYLLTLTGRSDGY
SAFSPNNKWAFFPSVAGAWVISREDFFNSKLFNQLKLRLSYGENGNQGVTAYQTFDRLTK
IQYLFGDGAPAENGLVINYNGIGSKNLKWETTRSFNIGVDFGLLENRISGSLDFYKTHTF
DLLLSRQVPVMNGYNSIWDNVGKTQNTGIELALSSRNIVHEDFSWNTDLTFAYNKNKILE
LRGDGKNDLTNAWLIGEPIRVFYDYNVIGVWQESDDIKNSWQPNAKPGDAKLEDVNHDGK
ITADDRKVIGSKMPAYTMGLGNSFQYKNWSLSLFLTGAFDVTKENNFANIERFLPNNGGN
FLSDIPYWTPERPSTEYVSPGYTPVNNHSYYLDASYLKIKDVSLGYAFPVDKWNVKGITG
IKAFINARNLYTFTKVKGYNPEALSVSATTGNPTTTNVLSPYPVARTVSLGVNVQF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaacaaaaaaaacgaacgctttctgtgggcgggcgatgcttggctgctttctg
acattgttatcgttcattcccccggccgggtttaccaggaatgcaataccaatggatttt
gcacatcagcaggcgccggtaaaaggaaaagttacagatgaaaataaaactccattggaa
ggagttacggttactgaaaaaggcacacaaaatagtacggtaacccgtgcagatggtacg
ttcagccttaccgtaagttctgatacatctgtactggttttttcggcaataggatatcag
acccttgaagtagcggcagcagcggcttcggaggttacactggtaaagcaggcgcaaacg
atagatgaggtagtagtggtgggctatggttctcagaagaaatccgatcttacaggtagt
gttgccaccatcagctccaaaaacctttcagaaatcaatgccccgaattttgttgataag
atccaggggcgtgtaccgggtatgaatatcaataccggcaatgcaaaacccggagaggtg
gcgtctatgacggtacggggcgaaaactccatttcagcatccaatcagccactgattatt
ttagatggagtgccctttaatggttcttttaatgatatcagcaccagctctattgaaaat
gtatcggttctgaaagatgcctcctccaccgccatttacgggtcgcgggctgccaatggc
gttattatagttactacaaaaaaagggcagaacgggaaaccgcgggtggcctataacggc
tatgtgggcgttcaaacagtagaaagaagattgcatttaatgaacggaccggaatatatc
cagtatatgcgcgattatcaggcatccaaaggaaaaacaggtgatgaactggatcctgaa
aattatttatttgcaaatgttctggaacaatggaaaaagggtgaggaagtgaactggcag
gatgaagtatttaataaagcggcattggtacaggagcaccagttaagtatatccgggggc
agtgaaaaatcaaattattatgcatcagtaggctatctgaaccaggatgggctggtaaaa
aatacttcctatgagcgttataacgtagcgctcgggttgaaccaaacgctgctgccctgg
ctgaaatcgggcttaaatgtacagctttctcagggaaacacgaacggcgttcagccaagt
attgataatgctgtaaagctgagcccctatggcaagaacagggatgaaaacgggaaccgt
gtgctgtatcccatgtacgcgcaaacgctttaccccaatccctttgcggatgaaaacgga
cttgatgataatacccgcagaaccgtttttgcggcaggcttcctggatgccaaattacct
ataaatggcctgagttttaaaacctccttcggaaccaactaccggcacgagtttaccggt
cagtattatggcgccaatacgtttagcggcatgagcatgaacgggtacggacaaatcgat
aattcagattattttgactggacctgggaaaacctcctgacctatgaccgcagtttcgga
gatcataaactaaatgtggtagggctgtacagtgcacagaaaacaaacctcaaaacctct
tctttatacggagaggatttcattattgataacgggtacaataatcttgaatctgcttca
aaaaaccagaagatcaactccaatcttaccaacactgcgttgatctcctatatgggaagg
atcaattatggttttaaggaccgttatttattaacgcttaccggcagatcagatggttac
agtgctttttcacccaataataaatgggcgtttttcccttctgttgcaggagcatgggtc
atatcccgggaagacttttttaacagcaagctgttcaaccagctaaaattaagattgtcc
tacggtgaaaacggaaaccagggtgtaaccgcctatcagacctttgatcgtttaacaaag
atccagtacctgttcggagacggtgctcccgcagaaaacgggctggtgattaattacaac
ggtatcggaagtaaaaacctgaaatgggaaacaacccgctcatttaacatcggtgttgat
ttcggcttgctggaaaaccggatcagcggtagcctcgacttttataaaacacacaccttt
gacctgttgctgagccgccaggtgccggtaatgaacggctataattctatatgggacaat
gtgggtaaaacacagaacacaggaatagagctggcgctgagcagtcgtaatattgtgcac
gaggatttctcctggaatacggatctgacctttgcctataataagaataaaattcttgaa
ttgcgcggcgatggcaaaaatgatctgaccaatgcctggctgatcggtgagccgatccgg
gttttctatgattacaatgttattggggtatggcaggaatcagatgatataaaaaactcc
tggcagcccaatgcaaaaccgggtgatgcaaagctggaggacgttaatcatgatgggaaa
ataactgctgatgaccgcaaagtcatcggctccaagatgccggcgtatacaatgggtctg
ggcaatagttttcaatataaaaactggtccctgtccttatttcttaccggcgcttttgat
gtgaccaaagagaataattttgctaatattgagcgctttttgcccaataacggcggcaac
ttcctgtcagatattccttactggacgcccgaacgccccagcacggaatatgtatcaccg
gggtatacaccggtcaataatcactcttattaccttgatgcctcttacttaaaaataaag
gacgtgtcgctgggctatgctttcccggtagataaatggaatgtaaaagggattacaggt
ataaaggccttcatcaatgccaggaacctgtacacgtttacaaaagtaaaagggtataac
ccggaagcactttctgtaagcgcaacaacgggcaaccccacaacaacaaatgttctttcg
ccctacccggtggcgcgtactgtttcactgggtgtgaatgttcaattttaa
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