Niabella ginsenosidivorans: A8C56_03415
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Entry
A8C56_03415 CDS
T04418
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A8C56_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_03415
Enzymes [BR:
nia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A8C56_03415
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A8C56_03415
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A8C56_03415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ANH80161
UniProt:
A0A1A9I0A4
LinkDB
All DBs
Position
789866..790645
Genome browser
AA seq
259 aa
AA seq
DB search
MPELPDLQAFSRNLTRSLKGKIVENITLTVDRRTNVSEKDLKAALSGKKLKQVERIGKQL
CWDFGKNARLCMHLMLHGKLVLMKDNEDPPKNRIASLKFDDQTLYLTDFQKAAHLILNPP
ESGAVDALSAQITGNWLAGQLKGSRAKIKAVLMDQHMIAGIGNAYADEILWEAGIAPQSI
AGKIPPAAVNKLAKSIGKVLRDAEKQILKSTPDIIAGEIRDFLKIHNAKKDKSPGGSKIL
NTTLGGRTTYYTEEQILYK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctacccgatcttcaggcttttagccgcaatctgaccaggtcattaaaaggt
aaaattgtagaaaatattacccttaccgttgaccggagaactaatgtgtctgaaaaagac
ttaaaagcagcccttagtggtaaaaaattaaagcaggttgaacgaatcggaaaacaacta
tgctgggatttcggcaagaacgcccggctttgcatgcatctgatgttgcatggaaagctt
gttttaatgaaagacaatgaagacccgcccaaaaatagaatcgcctcactcaaatttgac
gaccagacattatatcttaccgattttcaaaaggcggctcacctgatcctgaatccgccc
gaatccggggctgtagacgctctgtccgcacaaattaccggaaactggctcgccgggcaa
ctgaaaggcagccgcgcaaagattaaggctgttttgatggaccagcacatgatcgcaggt
attggtaatgcctatgcagatgagatcctgtgggaggcggggattgccccgcagtccatt
gcagggaagattcccccggcggcggttaacaaactggctaaatcaattggtaaagtgctc
agggatgcagaaaagcaaatcctgaagtcaactcctgatataattgccggagaaatacgc
gattttttaaaaattcacaatgctaaaaaggataaaagccctggtggcagcaagattctt
aatacaaccctgggtggcagaactacttattacacagaagagcagatcctgtataagtag
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