Niabella ginsenosidivorans: A8C56_05370
Help
Entry
A8C56_05370 CDS
T04418
Name
(GenBank) heparinase
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A8C56_05370
Enzymes [BR:
nia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
A8C56_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Sod_Fe_N
Ig_GP210_15th
Motif
Other DBs
NCBI-ProteinID:
ANH80495
UniProt:
A0A1A9HZI5
LinkDB
All DBs
Position
complement(1295082..1297064)
Genome browser
AA seq
660 aa
AA seq
DB search
MRCTQYTGLSILFIGIAFLLKAQQTPISQKDFDIINLNYPGLEKVKTAVAAHQYDKAATA
LLTYFKKKSADREPDFSASEENVSMDQPVDKATKATADSALLHKFQPHKGYGFFDYGKDI
NWQLWPVKDNEVRWQLHRVKWWQSMALVYRATHNERYATEWMAQFSDWVAKNPPGLSADN
DKYAWRPLEVSDRILNLAPAFSIFVSSPHFTPAFLMRFLKSYHQQADYLSTHYADKGNHR
LFEAQRVLFAGTSFPEFKNAPAWRKSGIEILNTEIKKQVYPDGVQWELSPNYHVAMINTF
LSALRSARAAGLEREFSAGYRETVEKMILATINYSFPDYTYPMFGDAKLVDKKSMLKAYN
SWAKAFPDNAIIQFFASQGSKGKQPPYLSHGLATSGFYTFRNGWKEDATVLVLKASPPGA
FHAQPDNGTFNLWIKGRNFTPDAGCYVYAGDSTIMKLRNWYRQTRVHSTLTLDNANMVIT
QAQQQQWKTGKGLDILTYTNPSYPKLKHQRSVLFIDQKYFLMIDRAIGKATGNIGVHFQL
KEDSKAVFDQHYHKVHTTYADGNNLLIQSLNKDQVSLKEEEGKVSYAYRREVSRPAFVFE
KPKTDGHPQTFVTILYPYSGEKVPEISLKENAGNNYDTNSLHLTLTINGRQKELVMKLAD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcactcaatatactggtcttagcatcctgtttataggaatcgctttccttctt
aaggcacagcaaacgcctatatcccaaaaagactttgatatcatcaaccttaattacccc
ggactggaaaaagtaaaaacagcggtagctgctcatcaatatgataaggcagctacggca
cttctgacctatttcaaaaagaaaagcgctgaccgggagccggatttcagcgcttcagaa
gagaatgtaagcatggatcagccggtggataaggctactaaggccactgcggacagcgcc
ttactgcataagtttcagccccacaagggctatggcttctttgattatggcaaagacatt
aactggcagctgtggccggtaaaagataacgaggttcgctggcaactgcaccgggtaaaa
tggtggcagtccatggccctggtatatcgcgctacccataatgagcggtatgcaacagaa
tggatggctcagttctcagactgggtagcaaaaaacccaccgggcctgtcggcagataac
gataaatatgcctggcgcccgctggaagtatctgacaggatcctgaacctggcgccggcc
ttcagcatctttgtaagctcaccgcattttacacctgcttttctgatgcgctttttaaaa
agctatcaccagcaggccgactatctttccacacattatgcagacaaaggcaatcaccgt
ttgtttgaagcgcagcgggtgttgtttgcaggcacttcctttcctgaatttaaaaatgcg
ccggcatggagaaaaagcggtattgaaatattgaataccgagatcaaaaaacaggtatac
cccgatggggtgcaatgggagctgtcgcccaattatcatgtagccatgatcaacaccttc
ctgagcgccttacgttccgcacgcgccgcagggcttgaaagggaattttcggccggctac
cgggaaacggttgaaaaaatgatcctggcaaccatcaattattcctttccggattatacg
tacccgatgtttggagatgccaaactggttgataaaaaaagcatgcttaaagcctataac
agttgggcaaaggcttttccggataatgcgatcatacagttttttgcttcgcaaggcagc
aaaggaaaacaacctccgtatctttcacacggccttgccacctccggcttctataccttc
cggaacgggtggaaggaggatgctacggtgctggtgctgaaggccagccctccgggggct
tttcatgcccagccggataacggtacttttaacctatggataaaagggcgcaactttact
ccggatgccggctgttatgtgtatgccggtgattcaaccattatgaagctgcggaactgg
tatcgccagacccgtgtgcacagcacgcttacattggataatgccaatatggtcattacg
caggcgcagcagcagcaatggaaaacaggtaaaggcctggatatccttacttataccaat
cccagctatccgaagctaaagcatcagcgcagtgtgctgttcatcgatcagaaatatttt
ttaatgatcgacagggccataggaaaagcaaccggaaacatcggcgtacattttcaatta
aaagaagacagcaaagccgtttttgaccagcactatcataaagtgcataccacctatgct
gatggcaataacctgctgatccaaagcctgaacaaagaccaggtatccctgaaagaagaa
gaaggcaaagtttcctatgcttaccgcagggaagtaagccgcccggcctttgtatttgaa
aaaccaaagacagacgggcatccgcaaacctttgtcaccattctgtacccatatagcggg
gaaaaagtgccggaaatttcattaaaagaaaatgccggaaataattatgatactaacagc
ctccaccttacgttaaccattaacggccggcaaaaagagctggtaatgaagctggcagat
tga
DBGET
integrated database retrieval system
