Niabella ginsenosidivorans: A8C56_05865
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Entry
A8C56_05865 CDS
T04418
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03030
DNA replication
nia03430
Mismatch repair
nia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8C56_05865
03430 Mismatch repair
A8C56_05865
03440 Homologous recombination
A8C56_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nia03032
]
A8C56_05865
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_05865
Enzymes [BR:
nia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A8C56_05865
DNA replication proteins [BR:
nia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A8C56_05865
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A8C56_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
DUF7508
KH_GLD-3_3rd
Motif
Other DBs
NCBI-ProteinID:
ANH80576
UniProt:
A0A1A9HYW7
LinkDB
All DBs
Position
1414279..1415658
Genome browser
AA seq
459 aa
AA seq
DB search
MHYAIVDIETTGAYAAAGSITEICIQVLDEAGTIVERFESLVNPVQQIPYSIQALTGITN
EMVQEAPLFEEIAEQVYTLLLDKVFVAHSVNFDYSFVKNQLSYCGFELNVKKLCTVRLSR
KIIPAHRSYSLGKLCEALGIRHVNKHRAGGDTDATVALFRLLLEKDTEGHIAKSLKKTSK
EQVLPPNVPKSDFDQLPYTPGIYYFHDEKGRIVYVGKAKNIRYRVSSHFSNNSTSRQRQN
FMRHVYRISFEECGTELMAAVKESTEIKRWWPRFNSSQKRREDLYGIVAYEDQNGYLRLG
VEKMSRGRQLLNSYHHIEGAKAALRQLVHDFNLCPRLCFIGEELFDEQLHRALCAGACIK
KEAPEVYNRRIAAAMEHLKNLPSFAIIDKGIHHDEKSCILVWNGSFYGMGFIAGDVRIEQ
PEQFREYVTPYKENSAITNMLFAYAKRYPSKIIQFNKVV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcattatgcaattgtagacatagaaacaacgggtgcttacgcagcagcaggcagtatt
acagagatctgcattcaggtgctggatgaagcaggtactattgtagagcgttttgaaagc
cttgttaaccccgtgcagcagataccgtattctattcaggcactaacgggcattaccaac
gaaatggtgcaggaggcgccgctgtttgaagaaatcgctgagcaggtgtataccttgttg
ctggataaggtttttgtagcgcatagcgtaaactttgattactcatttgtgaaaaatcag
ctctcttattgcggttttgaactgaatgtaaaaaagctgtgcactgttcgcttaagccgt
aagatcatcccggcgcaccggtcttatagcctgggaaaactttgtgaggcgctgggcatt
cgtcatgtaaataagcaccgggcaggaggcgatacagatgcaaccgttgcactgttccgt
ttgctgctggagaaggatacagaaggccatattgccaaaagccttaaaaagacctcaaaa
gagcaggtactgcctcctaatgttcctaaatcagactttgatcagttgccttatacaccg
ggcatttattattttcatgatgaaaagggccggatcgtgtatgtggggaaggctaaaaat
atccggtatcgtgtaagcagccatttcagtaataattccaccagccggcaacggcagaac
tttatgcgccatgtataccgcatcagttttgaggaatgcggaacggagctgatggctgct
gttaaagaatcaaccgaaattaaaaggtggtggccacggttcaactcatcgcagaaaagg
cgggaagatctttacgggatcgtggcttatgaagatcagaacgggtacctgcgcttaggg
gtggaaaaaatgagccgtggccggcaactgctgaactcgtatcatcatatagaaggagca
aaagctgccttgcgccagttagtacatgattttaatttgtgtccgcggttatgctttatt
ggcgaggaattgtttgatgaacaactgcacagggcattgtgcgccggtgcctgcatcaaa
aaggaagcccctgaagtgtacaataggcgtatagcagcagctatggagcatctgaaaaat
cttccttcctttgcgatcattgataaaggaattcatcatgatgaaaaatcctgtatcctt
gtatggaacggcagcttctatggcatgggttttattgcaggtgatgtccggattgaacag
ccggagcagttcagggaatatgtaactccttataaagagaacagcgccattaccaatatg
ttgtttgcttatgcaaaaagatacccttcaaaaattattcaattcaataaagtcgtttaa
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